Construct: ORF ccsbBroadEn_13414

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF011186.1_s300c1, BRDN0000388898
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
DOK6 (220164)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 220164 DOK6 docking protein 6 XM_017025610.1 99.7% 100% 30T>C;114A>G
2 human 220164 DOK6 docking protein 6 XM_017025611.1 99.7% 100% 30T>C;114A>G
3 human 220164 DOK6 docking protein 6 NM_152721.6 67.1% 67.3% 1_324del;354T>C;438A>G
4 human 220164 DOK6 docking protein 6 XM_011525875.2 54.2% 53.7% (many diffs)
5 mouse 623279 Dok6 docking protein 6 NM_001039173.1 61% 67% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
735
ORF length:
669
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TCCAAAAAAG
61TTGGCATGGA GTGTCTGGGG ACCAGGCTCA ATGACATCAG CCTTGGGGAG CCCGACCTTC
121TGGCCGCAGG AGTGCAGCGG GAACAGAATG AGAGATTCAA CGTGTATCTT ATGCCTACGC
181CAAACCTGGA TATTTATGGT GAATGCACAA TGCAGATCAC TCATGAAAAT ATCTATCTCT
241GGGATATCCA CAATGCCAAG GTCAAACTGG TGATGTGGCC TCTCAGCTCA CTGAGGAGAT
301ACGGTCGGGA CTCAACGTGG TTCACGTTTG AGTCAGGAAG AATGTGTGAC ACAGGAGAAG
361GACTATTCAC TTTTCAAACA AGGGAAGGAG AAATGATCTA TCAGAAGGTT CATTCTGCGA
421CACTGGCCAT AGCTGAGCAA CATGAAAGAT TAATGCTAGA AATGGAACAG AAGGCCCGGC
481TTCAGACAAG CTTGACTGAA CCAATGACAT TATCCAAATC AATATCTCTT CCTCGCAGCG
541CGTACTGGCA TCACATCACT CGTCAGAACA GCGTTGGTGA AATCTACAGT TTGCAAGGTC
601ATGGGTTTGG TTCGTCAAAG ATGTCTCGTG CACAGACATT TCCCAGCTAC GCCCCAGAAC
661AGAGTGAAGA GGCCCAGCAG CCGTTGTCGC GGTCCAGCAG CTATGGATTC AGCTACAGCT
721CCAGCCTCAT CCAATGCCCA ACTTTCTTGT ACAAAGTtgg cattataaga aagcattgct
781tatcaatttg ttgcaacgaa c

Download FASTA (ORF) (Full)