Construct: ORF ccsbBroadEn_13443

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF003032.1_s300c1, BRDN0000455287
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
TXLNGY (246126)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 246126 TXLNGY taxilin gamma pseudogene, Y... NR_045129.1 37.5% (many diffs)
2 human 246126 TXLNGY taxilin gamma pseudogene, Y... NR_045128.1 7.2% (many diffs)
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
462
ORF length:
393
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaacttTG TACAAAAAAG
61TTGGCACCAT GGAAGAAGCT GGACTTTGTG GGTTAAGAGA GAAAGCAGAT ATGTTGTGTA
121ACTCTGAATC ACATGATATT CTTCAACATC AAGACTCAAA TTGCAGTGCC ACAAGTAATA
181AACATTTATT GGAAGATGAA GAAGGCCGTG ACTTTATAAC AAAGAACAGG AGTTGGGTGA
241GCCCAGTGCA CTGCACACAA GAGTCAAGAA GGGAGCTTCC TGAGCAAGAA GTAGCCCCTC
301CGTCTGGTCA GCAAGCTTTA CAATGCAACA GGAACAAAGA AAAAGTCTTA GAGAGACAAG
361GTCTTTCCCT GTCACCCAGG CTGGAGCGCG GTGGTACATT CATGGGTCAT GGCAGCCTTA
421AACTCCCTGA GCTCGTGATC CTGTCTCTTC AGACTCTAGA GTTGCCAACT TTCTTGTACA
481AAGTTGGcat tataagaaag cattgcttat caatttgttg caacgaac

Download FASTA (ORF) (Full)