Construct: ORF ccsbBroadEn_13862
Construct Description:
- Construct Type:
- ORF
- Other Identifiers:
- ORF009213.1_s300c1, BRDN0000393447
- DNA Barcode:
- None
- Epitope Tag:
- None
- Notes:
- No stop codon in insert
Originally Annotated References:
- Gene:
- GNG7 (2788)
Vector Information:
- Vector Backbone:
- pDONR223
- Pol II Cassette 1:
- n/a
- Pol II Cassette 2:
- n/a
- Selection Marker:
- n/a
- Visible Reporter:
- n/a
- Epitope Tag:
- n/a
Current transcripts matched by this ORF:
| Taxon | Gene | Symbol | Description | Transcript | Nuc. Match %[?]A simple nucleotide-based global alignment percentage, calculated as follows: total nt. matches ---------------------------------- aligned length (incl. gaps) |
Prot. Match %[?]A simple amino acid-based global alignment percentage, calculated as follows: total aa. matches ---------------------------------- aligned length (incl. gaps) |
Match Diffs[?]This field may contain sequence annotations in HGVS format. For more information about HGVS annotations, please refer to the HGVS Quick Reference Guide. | |
|---|---|---|---|---|---|---|---|---|
| 1 | human | 2788 | GNG7 | G protein subunit gamma 7 | NM_052847.3 | 99.5% | 87.1% | 183delC |
| 2 | human | 2788 | GNG7 | G protein subunit gamma 7 | XM_017026606.1 | 99.5% | 87.1% | 183delC |
Sequence Information
Note: uppercase bases indicate empirically verified sequence.
- ORF start:
- 66
- ORF end:
- 270
- ORF length:
- 204
- Sequence:
-
1 gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG 61 TTGGCATGTC AGCCACTAAC AACATAGCCC AGGCCCGGAA GCTGGTGGAA CAGCTACGCA 121 TAGAAGCCGG GATTGAGCGC ATCAAGGTCT CCAAAGCGGC GTCTGACCTC ATGAGCTACT 181 GTGAGCAACA TGCCCGGAAC GACCCCCTGC TGGTCGGAGT CCCTGCCTCG GAGAACCCCT 241 TTAAGGAAAG AAACCTTGTA TTATTTTATA CCCAACTTTC TTGTACAAAG Ttggcattat 301 aagaaagcat tgcttatcaa tttgttgcaa cgaac