Construct: ORF ccsbBroadEn_14009

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF002161.1_s300c1, BRDN0000385474
DNA Barcode:
None
Epitope Tag:
None
Notes:
Early stop codon detected

Originally Annotated References:

Gene:
MAP3K14 (9020)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 9020 MAP3K14 mitogen-activated protein k... NM_003954.5 99.9% 1.5% 10delA;2706C>G
2 human 9020 MAP3K14 mitogen-activated protein k... XM_011525441.2 99.9% 1.5% 10delA;2706C>G
3 human 9020 MAP3K14 mitogen-activated protein k... XR_934591.1 60.8% (many diffs)
4 mouse 53859 Map3k14 mitogen-activated protein k... NM_016896.3 83.6% .5% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
237
ORF length:
171
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGGC AGTGTGGAAA TGGCCTGCCC AGGTGCCCCT GGCTCAGCAG TGGGGCAGCA
121GAAGGAACTC CCCAAAGCCA AGGAGAAGAC GCCGCCACTG GGGAAGAAAC AGAGCTCCGT
181CTACAAGCTT GAGGCCGTGG AGAAGAGCCC TGTGTTCTGC GGAAAGTGGG AGATCCTGAA
241TGACGTGATT ACCAAGGGCA CAGCCAAGGA AGGCTCCGAG GCAGGGCCAG CTGCCATCTC
301TATCATCGCC CAGGCTGAGT GTGAGAATAG CCAAGAGTTC AGCCCCACCT TTTCAGAACG
361CATTTTCATC GCTGGGTCCA AACAGTACAG CCAGTCCGAG AGTCTTGATC AGATCCCCAA
421CAATGTGGCC CATGCTACAG AGGGCAAAAT GGCCCGTGTG TGTTGGAAGG GAAAGCGTCG
481CAGCAAAGCC CGGAAGAAAC GGAAGAAGAA GAGCTCAAAG TCCCTGGCTC ATGCAGGAGT
541GGCCTTGGCC AAACCCCTCC CCAGGACCCC TGAGCAGGAG AGCTGCACCA TCCCAGTGCA
601GGAGGATGAG TCTCCACTCG GCGCCCCATA TGTTAGAAAC ACCCCGCAGT TCACCAAGCC
661TCTGAAGGAA CCAGGCCTTG GGCAACTCTG TTTTAAGCAG CTTGGCGAGG GCCTACGGCC
721GGCTCTGCCT CGATCAGAAC TCCACAAACT GATCAGCCCC TTGCAATGTC TGAACCACGT
781GTGGAAACTG CACCACCCCC AGGACGGAGG CCCCCTGCCC CTGCCCACGC ACCCCTTCCC
841CTATAGCAGA CTGCCTCATC CCTTCCCATT CCACCCTCTC CAGCCCTGGA AACCTCACCC
901TCTGGAGTCC TTCCTGGGCA AACTGGCCTG TGTAGACAGC CAGAAACCCT TGCCTGACCC
961ACACCTGAGC AAACTGGCCT GTGTAGACAG TCCAAAGCCC CTGCCTGGCC CACACCTGGA
1021GCCCAGCTGC CTGTCTCGTG GTGCCCATGA GAAGTTTTCT GTGGAGGAAT ACCTAGTGCA
1081TGCTCTGCAA GGCAGCGTGA GCTCAGGCCA GGCCCACAGC CTGACCAGCC TGGCCAAGAC
1141CTGGGCAGCA AGGGGCTCCA GATCCCGGGA GCCCAGCCCC AAAACTGAGG ACAACGAGGG
1201TGTCCTGCTC ACTGAGAAAC TCAAGCCAGT GGATTATGAG TACCGAGAAG AAGTCCACTG
1261GGCCACGCAC CAGCTCCGCC TGGGCAGAGG CTCCTTCGGA GAGGTGCACA GGATGGAGGA
1321CAAGCAGACT GGCTTCCAGT GCGCTGTCAA AAAGGTGCGG CTGGAAGTAT TTCGGGCAGA
1381GGAGCTGATG GCATGTGCAG GATTGACCTC ACCCAGAATT GTCCCTTTGT ATGGAGCTGT
1441GAGAGAAGGG CCTTGGGTCA ACATCTTCAT GGAGCTGCTG GAAGGTGGCT CCCTGGGCCA
1501GCTGGTCAAG GAGCAGGGCT GTCTCCCAGA GGACCGGGCC CTGTACTACC TGGGCCAGGC
1561CCTGGAGGGT CTGGAATACC TCCACTCACG AAGGATTCTG CATGGGGACG TCAAAGCTGA
1621CAACGTGCTC CTGTCCAGCG ATGGGAGCCA CGCAGCCCTC TGTGACTTTG GCCATGCTGT
1681GTGTCTTCAA CCTGATGGCC TGGGAAAGTC CTTGCTCACA GGGGACTACA TCCCTGGCAC
1741AGAGACCCAC ATGGCTCCGG AGGTGGTGCT GGGCAGGAGC TGCGACGCCA AGGTGGATGT
1801CTGGAGCAGC TGCTGTATGA TGCTGCACAT GCTCAACGGC TGCCACCCCT GGACTCAGTT
1861CTTCCGAGGG CCGCTCTGCC TCAAGATTGC CAGCGAGCCT CCGCCTGTGA GGGAGATCCC
1921ACCCTCCTGC GCCCCTCTCA CAGCCCAGGC CATCCAAGAG GGGCTGAGGA AAGAGCCCAT
1981CCACCGCGTG TCTGCAGCGG AGCTGGGAGG GAAGGTGAAC CGGGCACTAC AGCAAGTGGG
2041AGGTCTGAAG AGCCCTTGGA GGGGAGAATA TAAAGAACCA AGACATCCAC CGCCAAATCA
2101AGCCAATTAC CACCAGACCC TCCATGCCCA GCCGAGAGAG CTTTCGCCAA GGGCCCCAGG
2161GCCCCGGCCA GCTGAGGAGA CAACAGGCAG AGCCCCTAAG CTCCAGCCTC CTCTCCCACC
2221AGAGCCCCCA GAGCCAAACA AGTCTCCTCC CTTGACTTTG AGCAAGGAGG AGTCTGGGAT
2281GTGGGAACCC TTACCTCTGT CCTCCCTGGA GCCAGCCCCT GCCAGAAACC CCAGCTCACC
2341AGAGCGGAAA GCAACCGTCC CGGAGCAGGA ACTGCAGCAG CTGGAAATAG AATTATTCCT
2401CAACAGCCTG TCCCAGCCAT TTTCTCTGGA GGAGCAGGAG CAAATTCTCT CGTGCCTCAG
2461CATCGACAGC CTCTCCCTGT CGGATGACAG TGAGAAGAAC CCATCAAAGG CCTCTCAAAG
2521CTCGCGGGAC ACCCTGAGCT CAGGCGTACA CTCCTGGAGC AGCCAGGCCG AGGCTCGAAG
2581CTCCAGCTGG AACATGGTGC TGGCCCGGGG GCGGCCCACC GACACCCCAA GCTATTTCAA
2641TGGTGTGAAA GTCCAAATAC AGTCTCTTAA TGGTGAACAC CTGCACATCC GGGAGTTCCA
2701CCGGGTCAAA GTGGGAGACA TCGCCACTGG CATCAGCAGC CAGATCCCAG CTGCAGCCTT
2761CAGCTTGGTG ACCAAAGACG GGCAGCCTGT TCGCTACGAC ATGGAGGTGC CAGACTCGGG
2821CATCGACCTG CAGTGCACAC TGGCCCCTGA TGGCAGCTTC GCCTGGAGCT GGAGGGTCAA
2881GCATGGCCAG CTGGAGAACA GGCCCTACCC AACTTTCTTG TACAAAGTtg gcattataag
2941aaagcattgc ttatcaattt gttgcaacga ac

Download FASTA (ORF) (Full)