Construct: ORF ccsbBroadEn_14132

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF002194.1_s300c1, BRDN0000457342
DNA Barcode:
None
Epitope Tag:
None
Notes:
Early stop codon detected

Originally Annotated References:

Gene:
FAM135B (51059)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 51059 FAM135B family with sequence simila... XM_011517068.2 99.8% (many diffs)
2 human 51059 FAM135B family with sequence simila... XM_011517069.2 95.4% (many diffs)
3 human 51059 FAM135B family with sequence simila... XM_017013471.1 93.8% (many diffs)
4 human 51059 FAM135B family with sequence simila... XM_011517065.1 93.6% (many diffs)
5 human 51059 FAM135B family with sequence simila... NM_001362965.1 92.8% (many diffs)
6 human 51059 FAM135B family with sequence simila... NM_015912.4 92.8% (many diffs)
7 human 51059 FAM135B family with sequence simila... XM_011517064.2 92.8% (many diffs)
8 human 51059 FAM135B family with sequence simila... XM_011517056.2 92.5% (many diffs)
9 human 51059 FAM135B family with sequence simila... XM_011517058.2 92.5% (many diffs)
10 human 51059 FAM135B family with sequence simila... XM_011517059.1 92.5% (many diffs)
11 human 51059 FAM135B family with sequence simila... XM_011517060.2 92.5% (many diffs)
12 human 51059 FAM135B family with sequence simila... XM_011517061.2 92.5% (many diffs)
13 human 51059 FAM135B family with sequence simila... XM_011517062.1 92.5% (many diffs)
14 human 51059 FAM135B family with sequence simila... XM_011517063.2 92.5% (many diffs)
15 human 51059 FAM135B family with sequence simila... XM_011517072.2 91.1% (many diffs)
16 human 51059 FAM135B family with sequence simila... XM_011517073.2 89.3% (many diffs)
17 human 51059 FAM135B family with sequence simila... XM_011517074.1 86.7% (many diffs)
18 human 51059 FAM135B family with sequence simila... XM_011517070.2 78.9% (many diffs)
19 human 51059 FAM135B family with sequence simila... XR_001745532.1 50.9% (many diffs)
20 human 51059 FAM135B family with sequence simila... XR_001745531.1 50.4% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
81
ORF length:
12
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaacttTG TACAAAAAAG
61TTGGCACCAT GGAAGACGAC TGAGTGAAGT AGATTTTCAA CTCAAGGTGG ATCTGCACTT
121TACGGACAGT GAACAGCAGT TGAGGGATGT GGCTGGGGCA CCGATGGTCA GCAGCCGAAC
181GCTTGGCCTG CACTTCCACC CCCGGAATGG TCTGCACCAC CAGGTCCCGG TCATGTTCGA
241CTATTTCCAC CTGTCTGTGA TCTCGGTGAC CGTCCATGCT GCCCTGGTGG CTCTGCAGCA
301GCCATTGATC AGTTTTACTC GTCCAGGAAG AGGCTCCTGG CTTGGTAAAG GTGGCCCAGA
361CACCGGACAA GAACAGTCTA TCATTTCTCT GGAAAACTTG GTCTTTGGAG CTGGGTACTG
421CAAGCCGACT TCCTCAGAGG GAAGCTTCTA CATCACCTCT GAGAACTGCA TGCAGCACGC
481ACACAAGTGG CACCGAGACC TGTGGCTGTT GCTCCTCCAC GCTTACCGGG GTCTCCGTCT
541CCACTTCCTG GTGATCATGC GGGACATCCC AGAGCTGCCA CACACGGAGC TGGAGGCCCT
601TGCTGTTGAA GAAACACTTT CTCAGCTGTG CTCAGAGCTA CAGATGTTGA ACAATCCAGA
661GAAGATCGCT GAGCAGATAA GCAAGGATCT GGCCTGGCTC ACGTCCCACA TGATGACTCT
721GTGGACCCAG TTCCTGGACA CAGTCACTCT GCACTCCCAA GTGACCACTT ATCTCACCCA
781GGAACACCAC ACCCTGAGGG TCCGAAGGTT TTCTGAGGCC TTCTTTTACA TGGAGCACCA
841AAAACTTGCA GTCCTGACAT TTCAGGAGAA TCTGATACAG ACGCACAGCC AGCTGTCCCT
901GGATATCCGG AACTCGGAGT ACCTCACTAG CATGCCCCCG CTGCCTGCAG AGTGCCTGGA
961CATCGACGGC GATTGGAACA CCCTGCCGGT GATCTTTGAG GACAGATACG TGGACTGCCC
1021TGCGACAGGG CATAACTTGA GTGTTTATCC TAATTTTGAT GTTCCAGTGA CAAGTCCTAC
1081AATAATGAAT CTGAAAGACA AGGAAGATAA CTGTATGGTA AATAGCAATT TATCTTTTAG
1141GGAAGACCTT GTCTTGTCTA CCATAAAACC ATCCCAAATG GATTCTGATG AAGAAGTTGT
1201AAGGTGTCCA GAGCCGGGTG AGAATGTGGC CACACAAAAT CATATGGACA TGTGCTCTGA
1261ATCTCAGGTG TATATATCAA TTGGTGAATT TCAAAACAAA GCAGGTGTGC CTGAAGATGA
1321ATGTTGGACT GGCCAAACAT CTGATGCTGG GACATATCCA GTGGCAGATG TGGATACTTC
1381TAGAAGGAGT CCAGGTCCAG AGGATGGACA GGCCCCAGTG CTGACCTACA TTGACGTAAA
1441ATCTAGCAAT AAGAACCCCT CCAGAGCTGA ACCCCTGGTG GCCTTCAATG CTCAGCATGA
1501GAGTAGGAGC TCTAGAGATA AGTATGGATT AGACAGGACT GGGCTAAGCA AAGTGGTAGT
1561AGGTGGAAGC CACCAAAATG CCATCTCTTC AGACAAAACA ACTCTCCATG AATTAAGTAC
1621TCTAGGAAAG GGAATAGATC AAGAGGGGAA GATGGTGCTG CTAAGCTTGA AACTCACCCC
1681CTCTGAGCCC TGTGATCCAC TAAGTTCTAC CCTGAGGGAG CCCTTAGATA TTAGGTCTTC
1741CCTAAAGGAC TCTCACACAG AAGAGCAGGA GGAACTCTCA GTGCTATCCG GGGTCATCAA
1801GAGATCTTCA TCCATCATAT CTGATTCAGG CATTGAGAGT GAGCCAAGCT CCGTCGCCTG
1861GTCAGAGGCC CGAAGCAGGG CTCTGGAGTT GCCCAGTGAT CGGGAAGTCT TGCACCCGTT
1921TGTTCGAAGA CATGCCCTCC ACCGGAACTC CCTAGAGGGT GGACACACAG AAAGTAACAC
1981AAGTTTGCCA AGCGGCATCC AGGCTTCTCT CACCTCCATT AGCTCTTTAC CTTTTGAGGA
2041GGATGAGCGG GAGGTGGCAC TCACTAAGTT AACCAAGTCT GTATCTGCTC CCCACATCAG
2101TAGCCCAGAG GAGGCTGCTG AAGATGCGGA CACCAAGCAG CAAGATGGAG GTTTTGCTGA
2161ACCTTCAGAT ATGCACAGCA AGAGCCAAGG TTCCCCAGGA TCTTGCTCTC AACTTTGTGG
2221TGACTCTGGA ACAGATGCTG GAGCAGACCA TCCCCTGGTG GAGATAGTTT TAGATGCTGA
2281CAACCAGCAG GGCCCCGGAT ACATAGACAT CCCCAAAGGG AAAGGGAAGC AGTTTGATGC
2341TCAAGGACAC TGTCTTCCTG ATGGCAGGAC TGAGAACACT CCAGGTGTTG AAACCAAAGG
2401TCTTAATTTA AAAATACCAC GCGTCATAGC ACTTGAAAAC CCCAGGACCA GATCTCTTCA
2461TAGAGCACTT GAGGAAACCC CAAAGGGCAT GCCTAAAGAC TTGAATGTGG GTCAGCAAGC
2521TCTTTCCAAC AGTGGCATCT CAGAGGTTGA GGGTCTCTCT CAACATCAGG TGCCTGAATT
2581GAGCTGTACG TCAGCTGCTG ATGCCATCAA CAGGAACTCA ACAGGCCAGC AAAGCCAAAG
2641CGGTTCACCT TGCATTATGG ATGACACAGC ATTTAATAGA GGAGTGAATG CCTTCCCGGA
2701GGCTAAACAT AAAGCAGGCA CTGTGTGCCC CACTGTGACC CATTCCGTTC ATTCCCAGGT
2761TTTGAAAAAC CAAGAGCTGA AGGCAGGCAC TTCCATCATG GGGTCCCATC TGACTTCTGC
2821AGAGACCTTT ACTCTGGACA GCCTGAAGGC TGTGGAGGTT GTGAACTTAT CTGTGTCTTG
2881CACTGCCACC TGTCTCCCTT TCTCATCTGT GCCCAAGGAG ACCCCTGCCA GGGCTGGATT
2941CTCTTCCAAA CAGACCCTGT TTCCCATCAC CCATCAGCCT TTGGGATCCT TTGGAGTTGT
3001TTCTACCCAT TCCAGCACGT TGGATGAGGA AGTCAGTGAG AGGATGTTTA GTTTTTATCA
3061GGCCAAAGAA AAATTTAAAA AAGAACTGAA GATTGAAGGA TTTCTGTACA GTGACTTAAC
3121TGTACTAGCT TCTGATATAC CATATTTCCC ACCAGAGGAA GAGGAAGAAA ATTTGGAAGA
3181TGGAATTCAC CTGGTTGTCT GTGTCCATGG CCTGGATGGG AACAGTGCAG ACCTCCGGCT
3241GGTAAAGACT TTCATAGAAC TGGGGCTCCC TGGAGGAAAA CTGGACTTCC TAATGTCTGA
3301AAAGAATCAG ATGGACACAT TTGCAGATTT TGATACTATG ACGGATCGGT TATTGGATGA
3361AATCATTCAA CACATTCAGT TGTACAACCT CTCCATATCC CGAATTAGCT TCATTGGCCA
3421TTCTCTTGGC AACATCATCA TCCGATCGGT CCTCACACGG CCCCGGTTCC GGTATTACCT
3481CAACAAACTC CACACGTTCC TGTCACTCTC TGGGCCTCAC CTGGGAACCC TGTACAACAA
3541CAGCACCCTG GTTAGTACAG GCTTATGGCT CATGCAGAAA CTGAAGAAAT CCGGGTCTCT
3601ACTGCAGCTG ACCTTCAGGG ATAATGCTGA TTTGCGCAAA TGTTTCCTCT ACCAACTAAG
3661CCAAAAAACA GGGCTGCAGT ATTTTAAAAA CGTCGTGCTG GTTGCTTCTC CCCAAGACCG
3721TTATGTGCCA TTTCATTCAG CCAGGATTGA AATGTGTAAA ACTGCCCTTA AAGACAGACA
3781CACAGGGCCA GTTTATGCAG AAATGATCAA CAACCTCCTG GGCCCTCTGG TTGAAGCCAA
3841GGACTGCACT TTAATCCGAC ACAACGTGTT CCACGCCCTG CCCAACACTG CCAACACCCT
3901GATCGGCCGA GCCGCTCACA TCGCTGTGCT GGATTCAGAA CTCTTCCTGG AGAAGTTTTT
3961CTTGGTGGCA GGACTCAACT ACTTAAGTTG CCAACTTTCT TGTACAAAGT TGGcattata
4021agaaagcatt gcttatcaat ttgttgcaac gaac

Download FASTA (ORF) (Full)

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