Construct: ORF ccsbBroadEn_14392

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF010382.1_s300c1, BRDN0000389772
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
WDR66 (144406)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 144406 WDR66 WD repeat domain 66 NM_144668.6 99.4% 99.2% (many diffs)
2 human 144406 WDR66 WD repeat domain 66 NM_001178003.2 80.7% 79.5% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
3528
ORF length:
3462
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGTC AGATGCAGCA GAAGCTCCCC GAGAAGCAAC AGGAGAAAAT GGAGAAACAG
121AAATGAAAGA AGAGGAGGAA CCTAATCCAA ATTATAAAGA AGTAGAAGAT CCACAACAGG
181AATCAAAAGA TGACACAATA GCATGGAGAG AGTCTCAGGA GGAGGAGAGG AAAACGGGCG
241AGGAGGAAGG GGAGGAGGAG GAGAAAGAGG AGGAGGGGAA GGAGGACAAA AAGATTGTCA
301TGGAAGAAAC TGAGGAAAAG GCTGGAGAAG TCCAAGAGAA GGAGGCTTCA GGAATACAGG
361AAGAAACCAC AGTAGAGCCC CAAGAAGTCA CAGCGTCCAT GATCCGTTTG GAGACACAGA
421TTACTGATTC CCAGTCAATC ACATCAGGAA TTTTCCCAAA AACCCAAAGA GGTAGCAAGT
481CAAAGCTTTC CTTACAATTG GAGGATGCAG AAACAGATGA GCTTTTAAGA GACCTGAGCA
541CACAAATTGA ATTTCTTGAT TTGGATCAAA TCAGTCCTGA GGAACAACAG ATTAGTTCCC
601CTGAAAGGCA GCCCTCAGGA GAGCTTGAGG AGAAAACCGA CCGGATGCCC CAAGATGAAC
661TGGGACAAGA AAGAAGGGAC TTGGAGCCAG AAAACAGAGA GGAGGGACAA GAAAGGAGAG
721TATCCGACAT CCAGTCCAAA GCAGGGATCT CCCGGGAGTC ACTGGTGTCC AGCACCACAG
781AGGACATTCT GTTTCAAAAG GATAAAAGCA CCCCGGTGTA TCCCTTGACC ATGACCTGGT
841CGTTTGGATG GAACAGTTCT CTTCCTGTTT ACTATATTCG AGAGGAAAGG CAGAGAGTTC
901TTCTGTATGT TTGTGCTCAC ACTGCGATCA TCTACAATGT GTTCAGGAAC AATCAATACC
961ACCTTCAGGG CCACGCCAAT ATTATCTCCT GCCTCTGCGT CAGTGAAGAC AGGCGGTGGA
1021TCGCCACAGC AGACAAAGGG CCAGACTGCC TGGTGATTAT ATGGGACTCC TTCACAGGTA
1081TTCCTGTGCA CACAATATTT GACAGCTGCC CTGAAGGGAA TGGCATCATG GCCATGGCCA
1141TGACCCACGA CGCCAAGTAT CTGGCAACCA TCTCAGATGC TGAAGTCCAG AAGGTATGCA
1201TCTGGAAGTG GACTTTGGCA GTGGAAACGC CAGCATGCAC TCTCGAACTC CCCACAGAGT
1261ACGGTGTTCA GAACTACGTT ACTTTTAACC CAACAAATAA TAAAGAATTG GTGAGCAATA
1321GTAAAACACG GGCAATATAT TATGCATGGT ATGAAGAGAG GGATACACTG GCTCACAGTG
1381CCCCACTTTT AACTGAAAAA ACCTTCAACA AGCTTGTGGG AAAGTTTAGC CAGTCCATCT
1441TTCACTTGAA TTTAACACAA ATACTCTCAG CCACAATGGA AGGGAAGCTG GTTGTCTGGG
1501ACATACACCG CCCACCCTCA TCTGCCTCCA CCTTTTTGGG CTTTCCCTAT ATCAAGCCTT
1561GTAAATTGGT TCATTTGCAG AAAGAGGGTA TCACGGTACT TACCACAATT GATAGCTACA
1621TTGTCACAGG TGACATTAAG GGGAACATTA AGTTCTATGA TCACACCCTG TCTATTGTTA
1681ACTGGTACAG TCACTTGAAA CTGGGCGCCA TAAGAACTCT GTCCTTTTCA AAGACCCCAG
1741CAACTCCTCC TACTGAAAAA TCAAACTATC CTCCTGACTG CACTTTAAAA GGTGACCTTT
1801TTGTCTTAAG GAATTTTATC ATTGGAACAT CTGATGCCGC GGTGTACCAC TTAACAACAG
1861ATGGGACCAA ACTTGAGAAG TTATTTGTAG AGCCCAAGGA TGCCATTTGT GCCATCTCCT
1921GCCACCCATA TCAACCCCTC ATTGCCATCG GGAGCATCTG TGGGATGATC AAAGTGTGGA
1981ATTATGAAAA CAAACAATAT CTTTTCAGCA GGGTTTTTGA GAAGGGGTTT GGAGTCCAGA
2041GTCTGACCTA CAACCCCGAA GGAGCCCTTC TTGGAGCTGG CTTTACAGAG GGGACAGTTT
2101ACATTCTTGA TGCAATGTCT TTAGAAAATG AAAGCCCAGA GCCTTTCAAA TATTCCAGAA
2161CCAGTGTGAC TCATATAAGC TTTTCCCATG ACTCCCAGTA TATGGCAACT GCTGATAGAA
2221GTTTTACTGT GGCTGTTTAC ATGCTGGTGG TCAGAAATGG ACAGAGGGTC TGGGAGTACT
2281TAGCAAGACT TCGCTCTCAT CGCAAAAGCA TTCGAAGTCT CCTGTTTGGG GTTTACCTGG
2341ACAGCAATGA GCCTAGACTG CTGAGCCTTG GGACAGACAG GCTCTTGATA GAGTATGATC
2401TTCTCAGGAG CTACAAAGAC CACCTGGAAG TCCTGGACAT TCACCACACC GACCAGGGCT
2461GCTATCCCAC CTGCATGGTC TGGTACCCAC CACTCACCAG GGAACTCTTC CTGCTTATTT
2521GCAACAGTGG CTACAAAGTG AAGCTTTTTA ATGCTACTAC CAAAATGTGC AGAAAGACGC
2581TTCTGGGGCC AGCTTATGGT TCCCCTATTG AGCAGACACA AGTCCTCCCA GTGAGAAGCA
2641TGGCGGAGCT ACAGAAACGC TACTTGGTGT TTATTAACAG AGACAAGTTG GGACTTCAGA
2701TCTTACCAGT TGACGGCAAT CCACATAAGA CATCTGCTAT TGTTTGCCAC CCGAACGGGG
2761TGGCCGGCAT GGCCGTTTCC TATGATGGCT GCTACGCCTT CACTGCGGGA GGGCACGATC
2821GCTCGGTGGT GCAGTGGAAA ATCACCTTAA GTGTCCTGGA GGCAGCGGTT TCTCTTGGGG
2881GTGAAGACTT GACCCCATTC TATGGTCTGC TGTCTGGTGG CCGGGAAGGA AAATTCTACA
2941GGGAGCTAGA AGACTACTTC TACTATTCTC AGCTCCGCAG TCAAGGCATC GACACAATGG
3001AGACCAGAAA GGTGTCAGAA CACATTTGCC TGTCAGAGCT TCCTTTTGTC ATGAGAGCAA
3061TTGGCTTTTA CCCATCTGAA GAGAAGATTG ATGATATATT TAACGAAATC AAATTTGGTG
3121AATATGTGGA CACTGGAAAG CTAATCGACA AGATCAACTT ACCAGATTTC CTAAAAGTGT
3181ACCTTAACCA CAAGCCACCT TTTGGTAACA CCATGAGTGG CATCCACAAG AGCTTTGAGG
3241TGCTCGGTTA TACCAACTCC AAAGGGAAAA AGGCCATTCG AAGAGAGGAC TTCCTGAGAC
3301TGCTCGTTAC TAAAGGTGAG CATATGACGG AGGAGGAGAT GTTGGATTGC TTTGCTTCAC
3361TGTTTGGCCT GAATCCCGAG GGATGGAAAT CCGAGCCTGC AACCTGCTCC GTCAAAGGTT
3421CAGAAATTTG CCTTGAAGAA GAACTTCCAG ACGAAATCAC TGCAGAAATA TTCGCGACTG
3481AAATTCTTGG CTTAACCATT TCAGAAGATT CCGCCCAGGA TTGTCAGTGT CCAACTTTCT
3541TGTACAAAGT tggcattata agaaagcatt gcttatcaat ttgttgcaac gaac

Download FASTA (ORF) (Full)