Construct: ORF ccsbBroadEn_14635

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF019012.1_s300c1, BRDN0000458630
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
PTK2B (2185)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 2185 PTK2B protein tyrosine kinase 2 beta NM_004103.4 100% 100%
2 human 2185 PTK2B protein tyrosine kinase 2 beta NM_173174.3 100% 100%
3 human 2185 PTK2B protein tyrosine kinase 2 beta NM_173176.3 100% 100%
4 human 2185 PTK2B protein tyrosine kinase 2 beta XM_005273447.4 100% 100%
5 human 2185 PTK2B protein tyrosine kinase 2 beta XM_011544441.2 100% 100%
6 human 2185 PTK2B protein tyrosine kinase 2 beta XM_017013214.1 100% 100%
7 human 2185 PTK2B protein tyrosine kinase 2 beta XM_005273448.5 98.8% 98.8% 2485_2486ins36
8 human 2185 PTK2B protein tyrosine kinase 2 beta XM_011544442.3 98.7% 98.7% 1065_1066ins39
9 human 2185 PTK2B protein tyrosine kinase 2 beta XM_017013215.1 98.7% 98.7% 1065_1066ins39
10 human 2185 PTK2B protein tyrosine kinase 2 beta XM_017013216.2 97.5% 97.5% 1065_1066ins39;2446_2447ins36
11 human 2185 PTK2B protein tyrosine kinase 2 beta NM_173175.2 95.8% 95.8% 2213_2214ins126
12 mouse 19229 Ptk2b PTK2 protein tyrosine kinas... NM_001162366.1 89.2% 95.4% (many diffs)
13 mouse 19229 Ptk2b PTK2 protein tyrosine kinas... XM_006518726.3 89.2% 95.4% (many diffs)
14 mouse 19229 Ptk2b PTK2 protein tyrosine kinas... XM_011244994.2 89.2% 95.4% (many diffs)
15 mouse 19229 Ptk2b PTK2 protein tyrosine kinas... NM_001162365.1 88.9% 95% (many diffs)
16 mouse 19229 Ptk2b PTK2 protein tyrosine kinas... XM_017315926.1 88.3% 94.4% (many diffs)
17 mouse 19229 Ptk2b PTK2 protein tyrosine kinas... XM_017315927.1 88.3% 94.4% (many diffs)
18 mouse 19229 Ptk2b PTK2 protein tyrosine kinas... XM_017315928.1 88.3% 94.4% (many diffs)
19 mouse 19229 Ptk2b PTK2 protein tyrosine kinas... XM_017315929.1 88.3% 94.4% (many diffs)
20 mouse 19229 Ptk2b PTK2 protein tyrosine kinas... NM_172498.3 85.3% 91.2% (many diffs)
21 mouse 19229 Ptk2b PTK2 protein tyrosine kinas... XM_017315930.1 84.4% 90.2% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
3096
ORF length:
3027
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaactttg tacaaaaaag
61ttggcaccat gtctggggtg tccgagcccc tgagtcgagt aaagttgggc acgttacgcc
121ggcctgaagg ccctgcagag cccatggtgg tggtaccagt agatgtggaa aaggaggacg
181tgcgtatcct caaggtctgc ttctatagca acagcttcaa tcctgggaaa aacttcaaac
241tggtcaaatg cactgtccag acggagatcc gggagatcat cacctccatc ctgctgagcg
301ggcggatcgg gcccaacatc cggttggctg agtgctatgg gctgaggctg aagcacatga
361agtccgatga gatccactgg ctgcacccac agatgacggt gggtgaggtg caggacaagt
421atgagtgtct gcacgtggaa gccgagtgga ggtatgacct tcaaatccgc tacttgccag
481aagacttcat ggagagcctg aaggaggaca ggaccacgct gctctatttt taccaacagc
541tccggaacga ctacatgcag cgctacgcca gcaaggtcag cgagggcatg gccctgcagc
601tgggctgcct ggagctcagg cggttcttca aggatatgcc ccacaatgca cttgacaaga
661agtccaactt cgagctccta gaaaaggaag tggggctgga cttgtttttc ccaaagcaga
721tgcaggagaa cttaaagccc aaacagttcc ggaagatgat ccagcagacc ttccagcagt
781acgcctcgct cagggaggag gagtgcgtca tgaagttctt caacactctc gccggcttcg
841ccaacatcga ccaggagacc taccgctgtg aactcattca aggatggaac attactgtgg
901acctggtcat tggccctaaa gggatccgcc agctgactag tcaggacgca aagcccacct
961gcctggccga gttcaagcag atcaggtcca tcaggtgcct cccgctggag gagggccagg
1021cagtacttca gctgggcatt gaaggtgccc cccaggcctt gtccatcaaa acctcatccc
1081tagcagaggc tgagaacatg gctgacctca tagacggcta ctgccggctg cagggtgagc
1141accaaggctc tctcatcatc catcctagga aagatggtga gaagcggaac agcctgcccc
1201agatccccat gctaaacctg gaggcccggc ggtcccacct ctcagagagc tgcagcatag
1261agtcagacat ctacgcagag attcccgacg aaaccctgcg aaggcccgga ggtccacagt
1321atggcattgc ccgtgaagat gtggtcctga atcgtattct tggggaaggc ttttttgggg
1381aggtctatga aggtgtctac acaaatcaca aaggggagaa aatcaatgta gctgtcaaga
1441cctgcaagaa agactgcact ctggacaaca aggagaagtt catgagcgag gcagtgatca
1501tgaagaacct cgaccacccg cacatcgtga agctgatcgg catcattgaa gaggagccca
1561cctggatcat catggaattg tatccctatg gggagctggg ccactacctg gagcggaaca
1621agaactccct gaaggtgctc accctcgtgc tgtactcact gcagatatgc aaagccatgg
1681cctacctgga gagcatcaac tgcgtgcaca gggacattgc tgtccggaac atcctggtgg
1741cctcccctga gtgtgtgaag ctgggggact ttggtctttc ccggtacatt gaggacgagg
1801actattacaa agcctctgtg actcgtctcc ccatcaaatg gatgtcccca gagtccatta
1861acttccgacg cttcacgaca gccagtgacg tctggatgtt cgccgtgtgc atgtgggaga
1921tcctgagctt tgggaagcag cccttcttct ggctggagaa caaggatgtc atcggggtgc
1981tggagaaagg agaccggctg cccaagcctg atctctgtcc accggtcctt tataccctca
2041tgacccgctg ctgggactac gaccccagtg accggccccg cttcaccgag ctggtgtgca
2101gcctcagtga cgtttatcag atggagaagg acattgccat ggagcaagag aggaatgctc
2161gctaccgaac ccccaaaatc ttggagccca cagccttcca ggaaccccca cccaagccca
2221gccgacctaa gtacagaccc cctccgcaaa ccaacctcct ggctccaaag ctgcagttcc
2281aggttcctga gggtctgtgt gccagctctc ctacgctcac cagccctatg gagtatccat
2341ctcccgttaa ctcactgcac accccacctc tccaccggca caatgtcttc aaacgccaca
2401gcatgcggga ggaggacttc atccaaccca gcagccgaga agaggcccag cagctgtggg
2461aggctgaaaa ggtcaaaatg cggcaaatcc tggacaaaca gcagaagcag atggtggagg
2521actaccagtg gctcaggcag gaggagaagt ccctggaccc catggtttat atgaatgata
2581agtccccatt gacgccagag aaggaggtcg gctacctgga gttcacaggg cccccacaga
2641agcccccgag gctgggcgca cagtccatcc agcccacagc taacctggac cggactgatg
2701acctggtgta cctcaatgtc atggagctgg tgcgggccgt gctggagctc aagaatgagc
2761tctgtcagct gccccccgag ggctacgtgg tggtggtgaa gaatgtgggg ctgaccctgc
2821ggaagctcat cgggagcgtg gatgatctcc tgccttcctt gccgtcatct tcacggacag
2881agatcgaggg cacccagaaa ctgctcaaca aagacctggc agagctcatc aacaagatgc
2941ggctggcaca gcagaacgcc gtgacctccc taagtgagga gtgcaagagg cagatgctga
3001cggcttcaca caccctggct gtggacgcca agaacctgct cgacgctgtg gaccaggcca
3061aggttctggc caatctggcc cacccacctg cagagttgcc aactttcttg tacaaagttg
3121gcattataag aaagcattgc ttatcaattt gttgcaacga ac

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