Construct: ORF ccsbBroadEn_15012

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF011647.1_s300c1, BRDN0000384962
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ICMT (23463)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 23463 ICMT isoprenylcysteine carboxyl ... NM_012405.4 100% 100%
2 human 23463 ICMT isoprenylcysteine carboxyl ... XM_011541140.2 66.1% 66.1% 0_1ins288
3 mouse 57295 Icmt isoprenylcysteine carboxyl ... NM_133788.2 89% 96.1% (many diffs)
4 mouse 57295 Icmt isoprenylcysteine carboxyl ... NR_037908.1 14.9% (many diffs)
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
918
ORF length:
852
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGGC GGGCTGCGCG GCGCGGGCTC CGCCGGGCTC TGAGGCGCGT CTCAGCCTCG
121CCACCTTCCT GCTGGGCGCC TCggtgctcg cgctgccgct gctcacgCGC GCCGGCCTGC
181AGGGCCGCAC CGGGCTGGCG CTCTACGTGG CCGGGCTCAA CGCGCTGCTG CTGCTGCTCT
241ATCGGCCGCC TCGCTACCAG ATAGCCATCC GAGCTTGTTT CCTGGGGTTT GTGTTCGGCT
301GCGGCACGCT GCTAAGTTTT AGCCAGTCTT CTTGGAGTCA CTTTGGCTGG TACATGTGCT
361CCCTGTCATT GTTCCACTAT TCTGAATACT TGGTGACAGC AGTCAATAAT CCCAAAAGTC
421TGTCCTTGGA TTCCTTTCTC CTGAATCACA GCCTGGAGTA TACAGTAGCT GCTCTTTCTT
481CTTGGTTAGA GTTCACACTT GAAAATATCT TTTGGCCAGA ACTGAAGCAG ATTACCTGGC
541TCAGTGTCAC AGGGCTGCTG ATGGTGGTCT TCGGAGAATG TCTGAGGAAG GCGGCCATGT
601TTACAGCTGG CTCCAATTTC AACCACGTGG TACAGAATGA AAAATCAGAT ACACATACTC
661TGGTGACCAG TGGAGTGTAC GCTTGGTTTC GGCATCCTTC TTACGTCGGG TGGTTTTACT
721GGAGTATTGG AACTCAGGTG ATGCTGTGTA ACCCCATCTG CGGCGTCAGC TATGCCCTGA
781CAGTGTGGCG ATTCTTCCGC GATCGAACAG AAGAAGAAGA AATCTCACTA ATTCACTTTT
841TTGGAGAGGA GTACCTGGAG TATAAGAAGA GGGTGCCCAC GGGCCTGCCT TTCATAAAGG
901GGGTCAAGGT GGACCTGTGC CCAACTTTCT TGTACAAAGT tggcattata agaaagcatt
961gcttatcaat ttgttgcaac gaac

Download FASTA (ORF) (Full)