Construct: ORF ccsbBroadEn_15197

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF007246.2_s300c1, BRDN0000458329
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
BRSK1 (84446)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 84446 BRSK1 BR serine/threonine kinase 1 XM_011527395.2 78.3% 78.4% (many diffs)
2 human 84446 BRSK1 BR serine/threonine kinase 1 XM_005259327.3 68.5% 68.6% (many diffs)
3 human 84446 BRSK1 BR serine/threonine kinase 1 XM_024451739.1 67% 67.1% (many diffs)
4 human 84446 BRSK1 BR serine/threonine kinase 1 NM_032430.2 60.6% 60.6% (many diffs)
5 human 84446 BRSK1 BR serine/threonine kinase 1 XR_430213.4 42.6% (many diffs)
6 mouse 381979 Brsk1 BR serine/threonine kinase 1 XM_017322326.1 67.8% 74.1% (many diffs)
7 mouse 381979 Brsk1 BR serine/threonine kinase 1 NM_001003920.3 54.9% 60% (many diffs)
8 mouse 381979 Brsk1 BR serine/threonine kinase 1 XM_017322325.1 53% 57.9% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1485
ORF length:
1419
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaactttg tacaaaaaag
61ttggcatgcg gagcctgcca tccaacggag agctggaccc cgacgtccta gagagcatgg
121catcactggg ctgcttcagg gaccgcgaga ggctgcatcg cgagctgcgc agtgaggagg
181agaaccaaga aaagatgata tattatctgc ttttggatcg gaaggagcgg tatcccagct
241gtgaggacca ggacctgcct ccccggaatg atgttgaccc cccccggaag cgtgtggatt
301ctcccatgct gagtcgtcac gggaagcggc gaccagagcg gaagtccatg gaagtcctga
361gcatcaccga tgccgggggt ggtggctccc ctgtacccac acgacgggcc ttggagatgg
421cccagcacag ccagagatcc cgtagcgtca gtggagcctc cacgggtctg tcctccagcc
481ctctaagcag cccaaggagt ccggtctttt ccttttcacc ggagccgggg gctggagatg
541aggctcgagg cgggggctcc ccgacttcca aaacgcagac gctgccttct cggggcccca
601ggggtggggg cgccggggag cagcccccgc cccccagtgc ccgctccaca cccctgcccg
661gccccccagg ctccccgcgc tcctctggcg ggaccccctt gcactcgcct ctgcacacgc
721cccgggccag tcccaccggg accccgggga caacaccacc ccccagcccc ggcggtggcg
781tcgggggagc cgcctggagg agtcgtctca actccatccg caacagcttc ctgggctccc
841ctcgctttca ccggcgcaag atgcaggtcc ctaccgctga ggagatgtcc agcttgacgc
901cagagtcctc cccggagctg gcaaaacgct cctggttcgg gaacttcatc tccttggaca
961aagaagaaca aatattcctc gtgctaaagg acaaacctct cagcagcatc aaagcagaca
1021tcgtccatgc ctttctgtcg atccccagcc tgagtcacag tgtgctgtca cagaccagct
1081tcagggccga gtacaaagcc agtggcggcc cctccgtctt ccaaaagccc gtccgcttcc
1141aggtggacat cagctcctct gagggtccag agccctcccc gcgacgggac ggcagcggag
1201gtggtggcat ctactccgtc accttcactc tcatctcggg tcccagccgt cggttcaagc
1261gagtggtgga gaccatccag gcacagctcc tgagcactca tgaccagccc tccgtgcagg
1321ccctggcaga cgagaagaac ggggcccaga cccggcctgc tggtgcccca ccccgaagcc
1381tgcagccccc acccggccgc ccagacccag agctgagcag ctctccccgc cgagcccccc
1441ccaaggacaa gaagctcctg gccaccaacg ggacccctct gccctgccca actttcttgt
1501acaaagttgg cattataaga aagcattgct tatcaatttg ttgcaacgaa c

Download FASTA (ORF) (Full)