Construct: ORF ccsbBroadEn_15299

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF015341.1_s300c1, BRDN0000390494
DNA Barcode:
None
Epitope Tag:
None
Notes:
Early stop codon detected

Originally Annotated References:

Gene:
ZNF875 (284459)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 284459 ZNF875 zinc finger protein 875 NM_181786.3 99.7% 49.3% (many diffs)
2 human 284459 ZNF875 zinc finger protein 875 XM_024451470.1 99.7% 49.3% (many diffs)
3 human 284459 ZNF875 zinc finger protein 875 XM_017026675.1 96.7% 44.3% (many diffs)
4 human 284459 ZNF875 zinc finger protein 875 XM_017026674.1 96.5% 44.2% (many diffs)
5 human 284459 ZNF875 zinc finger protein 875 NM_001329763.1 96.3% 44.7% (many diffs)
6 human 284459 ZNF875 zinc finger protein 875 NM_001329764.1 96.3% 44.7% (many diffs)
7 human 284459 ZNF875 zinc finger protein 875 NM_001353803.1 96.3% 44.7% (many diffs)
8 human 284459 ZNF875 zinc finger protein 875 NM_001329761.1 96.1% 44.6% (many diffs)
9 human 284459 ZNF875 zinc finger protein 875 NM_001329762.1 96.1% 44.6% (many diffs)
10 human 284459 ZNF875 zinc finger protein 875 NM_001329767.1 95.8% 45.3% (many diffs)
11 human 284459 ZNF875 zinc finger protein 875 NM_001329765.1 95.6% 45.3% (many diffs)
12 human 284459 ZNF875 zinc finger protein 875 NM_001329766.1 95.6% 45.3% (many diffs)
13 human 284459 ZNF875 zinc finger protein 875 NM_001329769.1 93.8% 42.5% (many diffs)
14 human 284459 ZNF875 zinc finger protein 875 NM_001329768.1 93.6% 42.4% (many diffs)
15 human 284459 ZNF875 zinc finger protein 875 NM_001329770.1 93.4% 42.5% (many diffs)
16 human 284459 ZNF875 zinc finger protein 875 XM_017026673.1 91.5% 41.7% (many diffs)
17 human 284459 ZNF875 zinc finger protein 875 XM_017026672.1 91.4% 41.6% (many diffs)
18 human 284459 ZNF875 zinc finger protein 875 NM_001329774.1 90.4% 40% (many diffs)
19 human 284459 ZNF875 zinc finger protein 875 NM_001329775.1 90.4% 40% (many diffs)
20 human 284459 ZNF875 zinc finger protein 875 NM_001329776.1 90.4% 40% (many diffs)
21 human 284459 ZNF875 zinc finger protein 875 NM_001329777.1 90.4% 40% (many diffs)
22 human 284459 ZNF875 zinc finger protein 875 NM_001329778.1 90.4% 40% (many diffs)
23 human 284459 ZNF875 zinc finger protein 875 XM_017026688.2 90.4% 40% (many diffs)
24 human 284459 ZNF875 zinc finger protein 875 NM_001329771.1 90.3% 40% (many diffs)
25 human 284459 ZNF875 zinc finger protein 875 NM_001329772.1 90.3% 40% (many diffs)
26 human 284459 ZNF875 zinc finger protein 875 NM_001329773.1 90.3% 40% (many diffs)
27 human 284459 ZNF875 zinc finger protein 875 NM_001329779.2 82.4% 31.4% (many diffs)
28 human 284459 ZNF875 zinc finger protein 875 NR_138124.1 68.4% (many diffs)
29 human 284459 ZNF875 zinc finger protein 875 NR_138127.1 68.2% (many diffs)
30 human 284459 ZNF875 zinc finger protein 875 NR_138125.1 68.1% (many diffs)
31 human 284459 ZNF875 zinc finger protein 875 NR_138118.1 67.6% (many diffs)
32 human 284459 ZNF875 zinc finger protein 875 NR_138119.1 67.6% (many diffs)
33 human 284459 ZNF875 zinc finger protein 875 NR_138113.1 67.4% (many diffs)
34 human 284459 ZNF875 zinc finger protein 875 NR_138122.1 67.4% (many diffs)
35 human 284459 ZNF875 zinc finger protein 875 NR_138114.1 67.3% (many diffs)
36 human 284459 ZNF875 zinc finger protein 875 NR_138120.1 67.2% (many diffs)
37 human 284459 ZNF875 zinc finger protein 875 NR_138129.1 66.7% (many diffs)
38 human 284459 ZNF875 zinc finger protein 875 NR_138116.1 66.4% (many diffs)
39 human 284459 ZNF875 zinc finger protein 875 NR_138121.1 66.4% (many diffs)
40 human 284459 ZNF875 zinc finger protein 875 NR_138123.1 65.7% (many diffs)
41 human 284459 ZNF875 zinc finger protein 875 NR_138126.1 65.6% (many diffs)
42 human 284459 ZNF875 zinc finger protein 875 NR_138128.1 65.5% (many diffs)
43 human 284459 ZNF875 zinc finger protein 875 NR_138130.1 65.4% (many diffs)
44 human 284459 ZNF875 zinc finger protein 875 NR_138104.1 64.9% (many diffs)
45 human 284459 ZNF875 zinc finger protein 875 NR_138107.1 64.8% (many diffs)
46 human 284459 ZNF875 zinc finger protein 875 NR_138115.1 63.5% (many diffs)
47 human 284459 ZNF875 zinc finger protein 875 NR_138117.1 63.1% (many diffs)
48 human 284459 ZNF875 zinc finger protein 875 NR_138105.1 62.9% (many diffs)
49 human 284459 ZNF875 zinc finger protein 875 NR_138109.1 62% (many diffs)
50 human 284459 ZNF875 zinc finger protein 875 NR_138108.1 61.8% (many diffs)
51 human 284459 ZNF875 zinc finger protein 875 NR_138110.1 61.8% (many diffs)
52 human 284459 ZNF875 zinc finger protein 875 NR_138106.1 60.7% (many diffs)
53 human 284459 ZNF875 zinc finger protein 875 NR_138112.1 60.5% (many diffs)
54 human 284459 ZNF875 zinc finger protein 875 NR_138111.1 59.8% (many diffs)
55 human 284459 ZNF875 zinc finger protein 875 XM_017026702.2 58.3% 7.8% (many diffs)
56 human 284459 ZNF875 zinc finger protein 875 XM_024451468.1 58.3% 7.8% (many diffs)
57 human 284459 ZNF875 zinc finger protein 875 XM_024451469.1 58.3% 7.8% (many diffs)
58 human 284459 ZNF875 zinc finger protein 875 NR_138103.1 55.3% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1041
ORF length:
975
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TCGGCATGAG GGTCAACCAC ACAGTGTCTA CAATGCTCCC TACATGCATG GTTCACAGAC
121AAACCATGAG TTGTTCCGGG GCTGGAGGAA TAACGGCGTT CGTGGCATTC AGGGATGTGG
181CTGTGTACTT CACCCAGGAG GAGTGGAGGT TGTTGAGCCC TGCTCAGAGG ACCCTGCACA
241GGGAGGTGAT GCTGGAGACT TATAACCATC TGGTCTCACT GGAAATTCCA TCTTCTAAAC
301CAAAACTCAT TGCTCAGCTG GAGCGAGGGG AAGCGCCCTG GAGAGAGGAG AGAAAATGTC
361CACTGGACCT CTGTCCAGAA TCGAAGCCAG AAATTCAACT TAGTCCCTCC TGCCCTCTGA
421TTTTCTCCAG TCAGCAAGCT CTCAGCCAAC ATGTGTGGCT GAGTCATCTC TCTCAGCTGT
481TTTCAAGTTT ATGGGCAGGA AATCCTCTCC ACCTGGGAAA ACACTATCCA GAAGATCAGA
541AACAACAGCA GGATCCATTC TGCTTTAGTG GCAAAGCAGA ATGGATTCAA GAGGGAGAAG
601ACTCCAGACT CCTGTTTGGG AGAGTAAGCA AAAATGGCAC TTCAAAGGCA CTTTCCAGCC
661CACCTGAAGA ACAACAGCCA GCACAGTCCA AGGAAGACAA CACAGTGGTG GATATAGGGT
721CCAGCCCTGA ACGGAGGGCA GATCTAGAGG AAACAGACAA AGTATTGCAT GGTTTAGAAG
781TCTCAGGATT TGGAGAAATC AAATATGAAG AGTTTGGGCC AGGCTTTATC AAGGAGTCAA
841ACCTCCTTAG CCTCCAGAAG ACACAAACTG GGGAGACACC TTACATGTAC ACTGAGTGGG
901GAGACAGCTT TGGCAGTATG TCAGTCCTCA TCAAAAACCC AAGGACACAC TCTGGGGGAA
961AGCCTTATGT GTGCAGGGAA TGTGGGCGAG GCTTTACGTG GAAGTCAAAC CTGATCACAC
1021ATCAGAGGAC ACACTCAGGA TAgaaacctt atgtgtgcaa ggattgtgga cgaggcttta
1081cttggaagtc gaacctcttt acacatcagc ggacacactc agggctcaag ccttatgtgt
1141gcaaggaatg tgggcagagc tttagcctga agtcaaacct cattacccac cagagggcgc
1201acactgggga gaagccttat gtttgcaggg aatgtgggcg tggctttcgc cagcattcac
1261acctggtcag acacaagagg acacattcag gagagaagcc ttacatttgc agggagtgtg
1321agcaaggctt tagccagaag tcacacctca tcagacactt aaggacacac acaggagaga
1381agccttatgt atgcacagaa tgtgggcgtc actttagctg gaaatcaaac ctcaaaacac
1441accagaggac acactcaggg gttaaacctt atgtctgcct ggagtgcggg cagtgcttta
1501gcctgaagtc aaaccttaac aaacaccaga ggtcacacac gggggagaag ccatttgtat
1561gtacggagtg tgggcgaggc tttacccgga aatcaaccct gagcacgcac cagaggacac
1621actcagggga gaagccattt gtatgtgctg agtgtggacg aggctttaat gataagtcca
1681ccctcatttc acaccagagg acacattcag gggaaaagcc ttttatgtgc agggagtgtg
1741gcagaaggtt tcggcagaag cctaacctgt ttaggcacaa gagggcacac tcaggtgcct
1801ttgtgtgcag ggagtgtggg caaggctttt gtgctaagtt aactctcatt aaacaccaga
1861gagcacacgc aggggggaag cctcatgtgt gcagggagtg tgggcaaggc tttagccggc
1921agtcacacct cattagacac cagaggacac attcaggaga gaagccttat atttgcagaa
1981agtgtggacg gggctttagt cggAAGTCAA ACCTGATCAC ACATCAGAGG ACACACTCAG
2041GATACCCAAC TTTCTTGTAC AAAGTtggca ttataagaaa gcattgctta tcaatttgtt
2101gcaacgaac

Download FASTA (ORF) (Full)