Construct: ORF ccsbBroadEn_15353
Construct Description:
- Construct Type:
- ORF
- Other Identifiers:
- ORF005967.1_s300c1, BRDN0000394012
- DNA Barcode:
- None
- Epitope Tag:
- None
- Notes:
- No stop codon in insert
Originally Annotated References:
- Gene:
- ALB (213)
Vector Information:
- Vector Backbone:
- pDONR223
- Pol II Cassette 1:
- n/a
- Pol II Cassette 2:
- n/a
- Selection Marker:
- n/a
- Visible Reporter:
- n/a
- Epitope Tag:
- n/a
Current transcripts matched by this ORF:
| Taxon | Gene | Symbol | Description | Transcript | Nuc. Match %[?]A simple nucleotide-based global alignment percentage, calculated as follows: total nt. matches ---------------------------------- aligned length (incl. gaps) |
Prot. Match %[?]A simple amino acid-based global alignment percentage, calculated as follows: total aa. matches ---------------------------------- aligned length (incl. gaps) |
Match Diffs[?]This field may contain sequence annotations in HGVS format. For more information about HGVS annotations, please refer to the HGVS Quick Reference Guide. | |
|---|---|---|---|---|---|---|---|---|
| 1 | human | 213 | ALB | albumin | NM_000477.7 | 65% | 65% | 489_1127del |
Sequence Information
Note: uppercase bases indicate empirically verified sequence.
- ORF start:
- 66
- ORF end:
- 1254
- ORF length:
- 1188
- Sequence:
-
1 gttcgttgca acaaattgat gagcaatgct tttttataat gccaactttg tacaaaaaag 61 ttggcatgaa gtgggtaacc tttatttccc ttctttttct ctttagctcg gcttattcca 121 ggggtgtgtt tcgtcgagat gcacacaaga gtgaggttgc tcatcggttt aaagatttgg 181 gagaagaaaa tttcaaagcc ttggtgttga ttgcctttgc tcagtatctt cagcagtgtc 241 catttgaaga tcatgtaaaa ttagtgaatg aagtaactga atttgcaaaa acatgtgttg 301 ctgatgagtc agctgaaaat tgtgacaaat cacttcatac cctttttgga gacaaattat 361 gcacagttgc aactcttcgt gaaacctatg gtgaaatggc tgactgctgt gcaaaacaag 421 aacctgagag aaatgaatgc ttcttgcaac acaaagatga caacccaaac ctcccccgat 481 tggtgagacc agaggttgat gtgatgtgca ctgcttttca tgacaatgaa gagacatttt 541 tgaaaaaata cttatatgaa accactctag agaagtgctg tgccgctgca gatcctcatg 601 aatgctatgc caaagtgttc gatgaattta aacctcttgt ggaagagcct cagaatttaa 661 tcaaacaaaa ttgtgagctt tttgagcagc ttggagagta caaattccag aatgcgctat 721 tagttcgtta caccaagaaa gtaccccaag tgtcaactcc aactcttgta gaggtctcaa 781 gaaacctagg aaaagtgggc agcaaatgtt gtaaacatcc tgaagcaaaa agaatgccct 841 gtgcagaaga ctatctatcc gtggtcctga accagttatg tgtgttgcat gagaaaacgc 901 cagtaagtga cagagtcacc aaatgctgca cagaatcctt ggtgaacagg cgaccatgct 961 tttcagctct ggaagtcgat gaaacatacg ttcccaaaga gtttaatgct gaaacattca 1021 ccttccatgc agatatatgc acactttctg agaaggagag acaaatcaag aaacaaactg 1081 cacttgttga gctcgtgaaa cacaagccca aggcaacaaa agagcaactg aaagctgtta 1141 tggatgattt cgcagctttt gtagagaagt gctgcaaggc tgacgataag gagacctgct 1201 ttgccgagga gggtaaaaaa cttgttgctg caagtcaagc tgccttaggc ttatnnccaa 1261 ctttcttgta caaagttggc attataagaa agcattgctt atcaatttgt tgcaacgaac