Construct: ORF ccsbBroadEn_15482

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF018004.1_s300c1, BRDN0000385300
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
EIF3E (3646)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 3646 EIF3E eukaryotic translation init... NM_001568.3 99.9% 100% 1206G>A
2 human 3646 EIF3E eukaryotic translation init... XM_017013398.2 97% 95.6% (many diffs)
3 mouse 16341 Eif3e eukaryotic translation init... NM_008388.2 90.7% 100% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1401
ORF length:
1335
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaactttg tacaaaaaag
61ttggcatggc ggagtacgac ttgactactc gcatcgcgca ctttttggat cggcatctag
121tctttccgct tcttgaattt ctctctgtaa aggagatata taatgaaaag gaattattac
181aaggtaaatt ggaccttctt agtgatacca acatggtaga ctttgctatg gatgtataca
241aaaaccttta ttctgatgat attcctcatg ctttgagaga gaaaagaacc acagtggttg
301cacaactgaa acagcttcag gcagaaacag aaccaattgt gaagatgttt gaagatccag
361aaactacaag gcaaatgcag tcaaccaggg atggtaggat gctctttgac tacctggcgg
421acaagcatgg ttttaggcag gaatatttag atacactcta cagatatgca aaattccagt
481acgaatgtgg gaattactca ggagcagcag aatatcttta tttttttaga gtgctggttc
541cagcaacaga tagaaatgct ttaagttcac tctggggaaa gctggcctct gaaatcttaa
601tgcagaattg ggatgcagcc atggaagacc ttacacggtt aaaagagacc atagataata
661attctgtgag ttctccactt cagtctcttc agcagagaac atggctcatt cactggtctc
721tgtttgtttt cttcaatcac cccaaaggtc gcgataatat tattgacctc ttcctttatc
781agccacaata tcttaatgca attcagacaa tgtgtccaca cattcttcgc tatttgacta
841cagcagtcat aacaaacaag gatgttcgaa aacgtcggca ggttctaaaa gatctagtta
901aagttattca acaggagtct tacacatata aagacccaat tacagaattt gttgaatgtt
961tatatgttaa ctttgacttt gatggggctc agaaaaagct gagggaatgt gaatcagtgc
1021ttgtgaatga cttcttcttg gtggcttgtc ttgaggattt cattgaaaat gcccgtctct
1081tcatatttga gactttctgt cgcatccacc agtgtatcag cattaacatg ttggcagata
1141aattgaacat gactccagaa gaagctgaaa ggtggattgt aaatttgatt agaaatgcaa
1201gactggatgc caagattgat tctaaattag gtcatgtggt tatgggtaac aatgcagtct
1261caccctatca acaagtgatt gaaaagacca aaagcctttc ctttagaagc cagatgttgg
1321ccatgaatat tgagaagaaa cttaatcaga atagcaggtc agaggctcct aactgggcaa
1381ctcaagattc tggcttctac tnnccaactt tcttgtacaa agttggcatt ataagaaagc
1441attgcttatc aatttgttgc aacgaac

Download FASTA (ORF) (Full)

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