Construct: ORF ccsbBroadEn_15733

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF015837.1_s300c1, BRDN0000385416
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
SF3A3 (10946)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 10946 SF3A3 splicing factor 3a subunit 3 NM_006802.4 100% 100%
2 human 10946 SF3A3 splicing factor 3a subunit 3 NM_001320830.2 89.4% 89.4% 144_145ins159
3 mouse 75062 Sf3a3 splicing factor 3a, subunit 3 NM_029157.3 91.2% 99.2% (many diffs)
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1569
ORF length:
1503
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaactttg tacaaaaaag
61ttggcatgga gacaatactg gagcagcagc ggcgctatca tgaggagaag gaacggctca
121tggacgtcat ggctaaagag atgctcacca agaagtccac gctccgggac cagatcaatt
181ctgatcaccg cactcgggcc atgcaagata ggtatatgga ggtcagtggg aacctgaggg
241atttgtatga tgataaggat ggattacgaa aggaggagct caatgccatt tcaggaccca
301atgagtttgc tgaattctat aatagactca agcaaataaa ggaattccac cggaagcacc
361caaatgagat ctgtgtgcca atgtcagtgg aatttgagga actcctgaag gctcgagaga
421atccaagtga agaggcacaa aacttggtgg agttcacaga tgaagaggga tatggtcgtt
481atctcgatct ccatgactgt tacctcaagt acattaacct gaaggcatct gagaagctgg
541attatatcac atacctgtcc atctttgacc aattatttga cattcctaaa gaaaggaaga
601atgcagagta taagagatac ctagagatgc tgcttgagta ccttcaggat tacacagata
661gagtgaagcc tctccaagat cagaatgaac tttttgggaa gattcaggct gagtttgaga
721agaaatggga gaatgggacc tttcctggat ggccgaaaga gacaagcagt gccctgaccc
781atgctggagc ccatcttgac ctctctgcat tctcctcctg ggaggagttg gcttctctgg
841gtttggacag attgaaatct gctctcttag ctttaggctt gaaatgtggc gggaccctag
901aagagcgagc ccagagacta ttcagtacca aaggaaagtc cctggagtca cttgatacct
961ctttgtttgc caaaaatccc aagtcaaagg gcaccaagcg agacactgaa aggaacaaag
1021acattgcttt tctagaagcc cagatctatg aatatgtaga gattctcggg gaacagcgac
1081atctcactca tgaaaatgta cagcgcaagc aagccaggac aggagaagag cgagaagaag
1141aggaagaaga gcagatcagt gagagtgaga gtgaagatga agagaacgag atcatttaca
1201accccaaaaa cctgccactt ggctgggatg gcaaacctat tccctactgg ctgtataagc
1261ttcatggcct aaatatcaac tacaactgtg agatttgtgg aaactacacc taccgagggc
1321ccaaagcctt ccagcgacac tttgctgaat ggcgtcatgc tcatggcatg aggtgtttgg
1381gcatcccaaa cactgctcac tttgctaatg tgacacagat tgaagatgct gtctccttgt
1441gggccaaact gaaattgcag aaggcttcag aacgatggca gcctgacact gaggaagaat
1501atgaagactc aagtgggaat gttgtgaata agaagacata cgaggatctg aaaagacaag
1561gactgctctn nccaactttc ttgtacaaag ttggcattat aagaaagcat tgcttatcaa
1621tttgttgcaa cgaac

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