Construct: ORF ccsbBroadEn_16068

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF008706.1_s300c1, BRDN0000390424
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
NAPRT (93100)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 93100 NAPRT nicotinate phosphoribosyltr... NM_001286829.2 88.1% 86% (many diffs)
2 human 93100 NAPRT nicotinate phosphoribosyltr... NM_145201.6 85.7% 85.6% (many diffs)
3 human 93100 NAPRT nicotinate phosphoribosyltr... NM_001363145.1 80.7% 80.6% (many diffs)
4 human 93100 NAPRT nicotinate phosphoribosyltr... XM_017013976.2 75.5% 75.4% (many diffs)
5 human 93100 NAPRT nicotinate phosphoribosyltr... XM_017013978.2 74.1% 69.7% (many diffs)
6 human 93100 NAPRT nicotinate phosphoribosyltr... XM_017013977.2 70.4% 70.3% (many diffs)
7 human 93100 NAPRT nicotinate phosphoribosyltr... XM_017013975.2 66.9% 66.8% (many diffs)
8 human 93100 NAPRT nicotinate phosphoribosyltr... NM_001363146.1 50.1% 50% (many diffs)
9 human 93100 NAPRT nicotinate phosphoribosyltr... XM_024447332.1 47.3% 43.1% (many diffs)
10 human 93100 NAPRT nicotinate phosphoribosyltr... XM_017013979.2 43.5% 43.3% (many diffs)
11 human 93100 NAPRT nicotinate phosphoribosyltr... XM_024447333.1 38.9% 38.7% (many diffs)
12 mouse 223646 Naprt nicotinate phosphoribosyltr... NM_172607.3 71.2% 74.9% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1464
ORF length:
1398
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaactttg tacaaaaaag
61ttggcatggc gttgggctat tggcgcgcgg gccgggcgcg ggacgccgcc gagttcgagc
121tcttcttccg ccgctgcccg ttcggcggcg ccttcgcctt ggccgccggc ttgcgcgact
181gtgtgcgctt cctgcgcgcc ttccgcctgc gggacgccga cgtgcagttc ctggcctcgg
241tgctgccccc agacacggat cctgcgttct tcgagcacct tcgggccctc gactgctccg
301aggtgacggt gcgagccctg cccgagggct ccctcgcctt ccccggagtg ccgctcctgc
361aggtgtccgg gccgctcctg gtggtgcagc tgctggagac accgctgctc tgcctggtca
421gctacgccag cctggtggcc accaacgcag cgcggcttcg cttgatcgca gggccagaga
481agcggctgct agagatgggc ctgaggcggg ctcagggccc cgatgggggc ctgacagcct
541ccacctacag ctacctgggc ggcttcgaca gcagcagcaa cgtgctagcg ggccagctgc
601gaggtgtgcc ggtggccggg accctggccc actccttcgt cacttccttt tcaggcagcg
661aggtgccccc tgacccgatg ttggcgccag cagctggtga gggccctggg gtggacctgg
721cggccaaagc ccaggtgtgg ctggagcagg tgtgtgccca cctggggctg ggggtgcagg
781agccgcatcc aggcgagcgg gcagcctttg tggcctatgc cttggctttt ccccgggcct
841tccagggcct cctggacacc tacagcgtgt ggaggagtgg tctccccaac ttcctagcag
901tcgccttggc cctgggagag ctgggctacc gggcagtggg cgtgaggctg gacagtggtg
961acctgctaca gcaggctcag gagatccgca aggtcttccg agctgctgca gcccagttcc
1021aggtgccctg gctggagtca gtcctcatcg tagtcagcaa caacattgac gaggaggcgc
1081tggcccgact ggcccaggag ggcagtgagg tgaatgtcat tggcattggc accagtgtgg
1141tcacctgccc ccaacagcct tccctgggtg gcgtctataa gctggtggcc gtggggggcc
1201agccacgaat gaagctgacc gaggaccccg agaagcagac gttgcctggg agcaaggctg
1261ctttccggct cctgggctct gacgggtctc cactcatgga catgctgcag ttagcagaag
1321agccagtgcc acaggctggg caggagctga gggtgtggcc tccaggggcc caggagccct
1381gcaccgtgag gccagcccag gtggagccac tactgcggct ctgcctccag cagggacagg
1441tggctgcccc accgccctca tcctnnccaa ctttcttgta caaagttggc attataagaa
1501agcattgctt atcaatttgt tgcaacgaac

Download FASTA (ORF) (Full)