Gene: Human RBFOX2 (23543)

RNA binding fox-1 homolog 2

Additional Resources:

NBCI Gene record:
RBFOX2 (23543)

sgRNA constructs originally intended to target this gene (CRISPRko, NGG PAM)

NOTE: This table includes all CRISPRko sgRNA constructs that were intended to target this gene at the time they were designed. Because the quality and coverage of genomic reference data evolves over time, one or more of these constructs may no longer be considered a 100% sequence match for this gene. Check the "Matching Genes" column to verify the sequence match with this and any other genes in this taxon. To discover constructs that are sequence matches to current transcripts for this gene, click on the individual wild-type transcripts listed above.

shRNA constructs with 100% match to this gene

Matching is performed using the Specificity-Defining Region (SDR)[?] of the shRNAs. This list includes matches to any current transcript from gene 23543 (RBFOX2), regardless of what transcript the shRNAs were originally designed to target. For example, some shRNAs in this list may have been originally designed to target: (i) a transcript of an orthologous gene (in this collection, generally human-to-mouse or mouse-to-human), or (ii) a transcript of a different gene from the same or different taxon.

shRNA constructs with at least a near match to this gene

This list includes shRNAs that have a >84% (16 of 19 bases) SDR[?]match to transcripts from gene 23543 (RBFOX2), regardless of what transcript they were originally designed to target. For example, this list can include shRNAs that were originally designed to target: (i) a transcript of an orthologous gene (in this collection, generally human-to-mouse or mouse-to-human), or (ii) a transcript of a different gene from the same or different taxon.

ORF constructs matching current transcripts from this gene