Transcript: Human NM_001109.5

Homo sapiens ADAM metallopeptidase domain 8 (ADAM8), transcript variant 1, mRNA.

Source:
NCBI, updated 2019-08-07
Taxon:
Homo sapiens (human)
Gene:
ADAM8 (101)
Length:
3259
CDS:
52..2526

Additional Resources:

NCBI RefSeq record:
NM_001109.5
NBCI Gene record:
ADAM8 (101)

sgRNA constructs matching this transcript (CRISPRko, NGG PAM)

This list includes CRISPRko constructs with 100% (20mer + NGG) sequence match to the coding regions of this transcript.

No results found.

shRNA constructs matching this transcript with 100% SDR[?] match

This list includes all shRNAs that have a perfect SDR[?] match to Human NM_001109.5, regardless of what transcript they were originally designed to target. For example, this list can include shRNAs that were originally designed to target: (i) a different isoform or obsolete version of this transcript (as annotated by NCBI), (ii) a transcript of an orthologous gene (in this collection, generally human-to-mouse or mouse-to-human), or (iii) a transcript of a different gene (from the same or different taxon).

Clone ID Target Seq Vector Match Position Match Region[?] SDR Match %[?] Intrinsic Score[?] Adjusted Score[?] Matches Other Human Gene?[?] Orig. Target Gene[?] Addgene[?]
1 TRCN0000433364 GTGTTCAGGAGGCCACATATA pLKO_005 2832 3UTR 100% 13.200 18.480 N ADAM8 n/a
2 TRCN0000006669 CGTGGACAAGCTATATCAGAA pLKO.1 747 CDS 100% 4.950 6.930 N ADAM8 n/a
3 TRCN0000006671 GCATGACAACGTACAGCTCAT pLKO.1 903 CDS 100% 4.050 3.240 N ADAM8 n/a
4 TRCN0000006670 CCGGCTACACAGAGACCTATA pLKO.1 293 CDS 100% 10.800 7.560 N ADAM8 n/a
5 TRCN0000422202 GCATCATCGTCTACCGCAAAG pLKO_005 2072 CDS 100% 6.000 4.200 N ADAM8 n/a
6 TRCN0000006668 CCAGAGAAGGTTTGCTGGAAA pLKO.1 1828 CDS 100% 4.950 3.465 N ADAM8 n/a
7 TRCN0000006667 GCTGCTGTTCTAACCTCAGTA pLKO.1 2644 3UTR 100% 4.950 3.465 N ADAM8 n/a
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shRNA constructs with at least a near match to this transcript

This list includes shRNAs that have at least a >84% (16 of 19 bases) SDR[?] match to the transcript NM_001109.5, regardless of what transcript they were originally designed to target. For example, this list can include shRNAs that were originally designed to target: (i) a different isoform or obsolete version of this transcript (as annotated by NCBI), (ii) a transcript of an orthologous gene (in this collection, generally human-to-mouse or mouse-to-human), or (iii) a transcript of a different gene (from the same or different taxon). NOTE: this download is a superset of the above result set.

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All ORF constructs matching this transcript

No results found.