Transcript: Human NM_001303100.2

Homo sapiens glutamate rich 1 (ERICH1), transcript variant 2, mRNA.

Source:
NCBI, updated 2019-05-31
Taxon:
Homo sapiens (human)
Gene:
ERICH1 (157697)
Length:
3157
CDS:
64..1332

Additional Resources:

NCBI RefSeq record:
NM_001303100.2
NBCI Gene record:
ERICH1 (157697)

sgRNA constructs matching this transcript (CRISPRko, NGG PAM)

This list includes CRISPRko constructs with 100% (20mer + NGG) sequence match to the coding regions of this transcript.

No results found.

shRNA constructs matching this transcript with 100% SDR[?] match

This list includes all shRNAs that have a perfect SDR[?] match to Human NM_001303100.2, regardless of what transcript they were originally designed to target. For example, this list can include shRNAs that were originally designed to target: (i) a different isoform or obsolete version of this transcript (as annotated by NCBI), (ii) a transcript of an orthologous gene (in this collection, generally human-to-mouse or mouse-to-human), or (iii) a transcript of a different gene (from the same or different taxon).

Clone ID Target Seq Vector Match Position Match Region[?] SDR Match %[?] Intrinsic Score[?] Adjusted Score[?] Matches Other Human Gene?[?] Orig. Target Gene[?] Addgene[?]
1 TRCN0000172285 CCAGAAACATGCTGAGCCTTT pLKO.1 207 CDS 100% 4.050 5.670 N ERICH1 n/a
2 TRCN0000442020 CACAGATGGCACCACAATAAG pLKO_005 516 CDS 100% 13.200 10.560 N ERICH1 n/a
3 TRCN0000442051 TATGACGGTGTCTCCAGAGAT pLKO_005 1120 CDS 100% 4.950 3.960 N ERICH1 n/a
4 TRCN0000423111 TTTGAAGTCAACACAGGAAAT pLKO_005 1092 CDS 100% 10.800 7.560 N ERICH1 n/a
5 TRCN0000436624 GATCCTCATGACCAGCCAAAG pLKO_005 373 CDS 100% 6.000 4.200 N ERICH1 n/a
6 TRCN0000168249 CAGAGTCTGTTACAGGAGAAA pLKO.1 481 CDS 100% 4.950 3.465 N ERICH1 n/a
7 TRCN0000414789 GCTGCTGGTGTCAGTTTCATG pLKO_005 610 CDS 100% 4.950 3.465 N ERICH1 n/a
8 TRCN0000418736 CTGTTACAGGAGAAATCTCAG pLKO_005 487 CDS 100% 4.050 2.835 N ERICH1 n/a
9 TRCN0000168841 CTGGAAATGTTCCCAGAACAT pLKO.1 1285 CDS 100% 0.495 0.347 N ERICH1 n/a
10 TRCN0000168162 CCTGCAAGATACTGAGAGATT pLKO.1 1254 CDS 100% 4.950 2.970 N ERICH1 n/a
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shRNA constructs with at least a near match to this transcript

This list includes shRNAs that have at least a >84% (16 of 19 bases) SDR[?] match to the transcript NM_001303100.2, regardless of what transcript they were originally designed to target. For example, this list can include shRNAs that were originally designed to target: (i) a different isoform or obsolete version of this transcript (as annotated by NCBI), (ii) a transcript of an orthologous gene (in this collection, generally human-to-mouse or mouse-to-human), or (iii) a transcript of a different gene (from the same or different taxon). NOTE: this download is a superset of the above result set.

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All ORF constructs matching this transcript

No results found.