Transcript: Human NM_001304351.2

Homo sapiens ADAM metallopeptidase domain 28 (ADAM28), transcript variant 4, mRNA.

Source:
NCBI, updated 2019-05-31
Taxon:
Homo sapiens (human)
Gene:
ADAM28 (10863)
Length:
6956
CDS:
82..2346

Additional Resources:

NCBI RefSeq record:
NM_001304351.2
NBCI Gene record:
ADAM28 (10863)

sgRNA constructs matching this transcript (CRISPRko, NGG PAM)

This list includes CRISPRko constructs with 100% (20mer + NGG) sequence match to the coding regions of this transcript.

No results found.

shRNA constructs matching this transcript with 100% SDR[?] match

This list includes all shRNAs that have a perfect SDR[?] match to Human NM_001304351.2, regardless of what transcript they were originally designed to target. For example, this list can include shRNAs that were originally designed to target: (i) a different isoform or obsolete version of this transcript (as annotated by NCBI), (ii) a transcript of an orthologous gene (in this collection, generally human-to-mouse or mouse-to-human), or (iii) a transcript of a different gene (from the same or different taxon).

Clone ID Target Seq Vector Match Position Match Region[?] SDR Match %[?] Intrinsic Score[?] Adjusted Score[?] Matches Other Human Gene?[?] Orig. Target Gene[?] Addgene[?]
1 TRCN0000431276 TCAAGGTGGGTCGGATAATTT pLKO_005 1779 CDS 100% 15.000 21.000 N ADAM28 n/a
2 TRCN0000427299 TGTTCCCAATGGCGGTCATTT pLKO_005 2096 CDS 100% 13.200 18.480 N ADAM28 n/a
3 TRCN0000051518 GCAAGAACTAATGGCTAAATT pLKO.1 2359 3UTR 100% 15.000 10.500 N ADAM28 n/a
4 TRCN0000432567 GTATTTGAGATGGCTAATTAT pLKO_005 772 CDS 100% 15.000 10.500 N ADAM28 n/a
5 TRCN0000051521 CCTGGATAATGGTGAGTTTAA pLKO.1 714 CDS 100% 13.200 9.240 N ADAM28 n/a
6 TRCN0000051522 CGTCTCAGCTATGACAAGTTT pLKO.1 1219 CDS 100% 5.625 3.938 N ADAM28 n/a
7 TRCN0000051520 GCCCACAAATTATGGATGATT pLKO.1 374 CDS 100% 5.625 3.938 N ADAM28 n/a
8 TRCN0000051519 GCCTGAAATGTGTAATGGTAA pLKO.1 1503 CDS 100% 4.950 3.465 N ADAM28 n/a
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shRNA constructs with at least a near match to this transcript

This list includes shRNAs that have at least a >84% (16 of 19 bases) SDR[?] match to the transcript NM_001304351.2, regardless of what transcript they were originally designed to target. For example, this list can include shRNAs that were originally designed to target: (i) a different isoform or obsolete version of this transcript (as annotated by NCBI), (ii) a transcript of an orthologous gene (in this collection, generally human-to-mouse or mouse-to-human), or (iii) a transcript of a different gene (from the same or different taxon). NOTE: this download is a superset of the above result set.

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All ORF constructs matching this transcript

No results found.