Transcript: Human NM_001367871.1

Homo sapiens fibrosin like 1 (FBRSL1), transcript variant 2, mRNA.

Source:
NCBI, updated 2019-08-08
Taxon:
Homo sapiens (human)
Gene:
FBRSL1 (57666)
Length:
4839
CDS:
421..3429

Additional Resources:

NCBI RefSeq record:
NM_001367871.1
NBCI Gene record:
FBRSL1 (57666)

sgRNA constructs matching this transcript (CRISPRko, NGG PAM)

This list includes CRISPRko constructs with 100% (20mer + NGG) sequence match to the coding regions of this transcript.

No results found.

shRNA constructs matching this transcript with 100% SDR[?] match

This list includes all shRNAs that have a perfect SDR[?] match to Human NM_001367871.1, regardless of what transcript they were originally designed to target. For example, this list can include shRNAs that were originally designed to target: (i) a different isoform or obsolete version of this transcript (as annotated by NCBI), (ii) a transcript of an orthologous gene (in this collection, generally human-to-mouse or mouse-to-human), or (iii) a transcript of a different gene (from the same or different taxon).

Clone ID Target Seq Vector Match Position Match Region[?] SDR Match %[?] Intrinsic Score[?] Adjusted Score[?] Matches Other Human Gene?[?] Orig. Target Gene[?] Addgene[?]
1 TRCN0000262623 TATGCTCTTTAGACGTTTAAA pLKO_005 3704 3UTR 100% 15.000 21.000 N FBRSL1 n/a
2 TRCN0000344424 CGACATTCCAGCGTGAGTTTC pLKO_005 1837 CDS 100% 10.800 14.040 N FBRSL1 n/a
3 TRCN0000262622 ATCCTGCCTCCAACCCATTTG pLKO_005 2264 CDS 100% 10.800 7.560 N FBRSL1 n/a
4 TRCN0000262621 TGGGCTCTGAGAAGCTCTTTG pLKO_005 1073 CDS 100% 10.800 7.560 N FBRSL1 n/a
5 TRCN0000166364 CACACACACACACACACACAA pLKO.1 4484 3UTR 100% 4.950 2.475 Y KAAG1 n/a
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shRNA constructs with at least a near match to this transcript

This list includes shRNAs that have at least a >84% (16 of 19 bases) SDR[?] match to the transcript NM_001367871.1, regardless of what transcript they were originally designed to target. For example, this list can include shRNAs that were originally designed to target: (i) a different isoform or obsolete version of this transcript (as annotated by NCBI), (ii) a transcript of an orthologous gene (in this collection, generally human-to-mouse or mouse-to-human), or (iii) a transcript of a different gene (from the same or different taxon). NOTE: this download is a superset of the above result set.

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All ORF constructs matching this transcript

No results found.