Transcript: Mouse NM_010078.3

Mus musculus dystrophin related protein 2 (Drp2), mRNA.

Source:
NCBI, updated 2017-05-20
Taxon:
Mus musculus (mouse)
Gene:
Drp2 (13497)
Length:
6983
CDS:
237..3110

Additional Resources:

NCBI RefSeq record:
NM_010078.3
NBCI Gene record:
Drp2 (13497)

sgRNA constructs matching this transcript (CRISPRko, NGG PAM)

This list includes CRISPRko constructs with 100% (20mer + NGG) sequence match to the coding regions of this transcript.

No results found.

shRNA constructs matching this transcript with 100% SDR[?] match

This list includes all shRNAs that have a perfect SDR[?] match to Mouse NM_010078.3, regardless of what transcript they were originally designed to target. For example, this list can include shRNAs that were originally designed to target: (i) a different isoform or obsolete version of this transcript (as annotated by NCBI), (ii) a transcript of an orthologous gene (in this collection, generally human-to-mouse or mouse-to-human), or (iii) a transcript of a different gene (from the same or different taxon).

Clone ID Target Seq Vector Match Position Match Region[?] SDR Match %[?] Intrinsic Score[?] Adjusted Score[?] Matches Other Mouse Gene?[?] Orig. Target Gene[?] Addgene[?]
1 TRCN0000108703 GCCACAACCTTAAAGAATAAA pLKO.1 2244 CDS 100% 15.000 21.000 N Drp2 n/a
2 TRCN0000440354 CTGACACACACTCTCGAATTG pLKO_005 2380 CDS 100% 10.800 15.120 N Drp2 n/a
3 TRCN0000428203 GCATACTCTGGAACATCTATT pLKO_005 917 CDS 100% 13.200 10.560 N Drp2 n/a
4 TRCN0000108704 GCTGAGCAAGTGAAGCATCAA pLKO.1 2037 CDS 100% 4.950 3.960 N Drp2 n/a
5 TRCN0000108702 CGCCTGGATCTGGTAACTTTA pLKO.1 1485 CDS 100% 13.200 9.240 N Drp2 n/a
6 TRCN0000429460 GGACTTTGCCACAACCTTAAA pLKO_005 2237 CDS 100% 13.200 9.240 N DRP2 n/a
7 TRCN0000108701 GCCATGAATCTGTGTTGGAAT pLKO.1 468 CDS 100% 4.950 3.465 N Drp2 n/a
8 TRCN0000420450 TATCCAAGCCATCAAGCTATT pLKO_005 1049 CDS 100% 10.800 6.480 N Drp2 n/a
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shRNA constructs with at least a near match to this transcript

This list includes shRNAs that have at least a >84% (16 of 19 bases) SDR[?] match to the transcript NM_010078.3, regardless of what transcript they were originally designed to target. For example, this list can include shRNAs that were originally designed to target: (i) a different isoform or obsolete version of this transcript (as annotated by NCBI), (ii) a transcript of an orthologous gene (in this collection, generally human-to-mouse or mouse-to-human), or (iii) a transcript of a different gene (from the same or different taxon). NOTE: this download is a superset of the above result set.

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All ORF constructs matching this transcript

No results found.