Transcript: Mouse NM_010345.4

Mus musculus growth factor receptor bound protein 10 (Grb10), transcript variant 1, mRNA.

Source:
NCBI, updated 2017-05-27
Taxon:
Mus musculus (mouse)
Gene:
Grb10 (14783)
Length:
5089
CDS:
335..2125

Additional Resources:

NCBI RefSeq record:
NM_010345.4
NBCI Gene record:
Grb10 (14783)

sgRNA constructs matching this transcript (CRISPRko, NGG PAM)

This list includes CRISPRko constructs with 100% (20mer + NGG) sequence match to the coding regions of this transcript.

No results found.

shRNA constructs matching this transcript with 100% SDR[?] match

This list includes all shRNAs that have a perfect SDR[?] match to Mouse NM_010345.4, regardless of what transcript they were originally designed to target. For example, this list can include shRNAs that were originally designed to target: (i) a different isoform or obsolete version of this transcript (as annotated by NCBI), (ii) a transcript of an orthologous gene (in this collection, generally human-to-mouse or mouse-to-human), or (iii) a transcript of a different gene (from the same or different taxon).

Clone ID Target Seq Vector Match Position Match Region[?] SDR Match %[?] Intrinsic Score[?] Adjusted Score[?] Matches Other Mouse Gene?[?] Orig. Target Gene[?] Addgene[?]
1 TRCN0000109917 CCAGAGTAATCCAAAGGCGTT pLKO.1 1906 CDS 100% 2.160 1.728 N Grb10 n/a
2 TRCN0000109919 GCAGTTAAGAACTGCATCTCT pLKO.1 550 CDS 100% 0.300 0.240 N Grb10 n/a
3 TRCN0000109915 CCCTGGAATAACCTTGACAAT pLKO.1 2457 3UTR 100% 4.950 3.465 N Grb10 n/a
4 TRCN0000109918 GCACACGGATGAATATCCTAA pLKO.1 1737 CDS 100% 4.950 3.465 N Grb10 n/a
5 TRCN0000109916 CCATGCCAAGTGAGAGCAAAT pLKO.1 1050 CDS 100% 10.800 6.480 N Grb10 n/a
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shRNA constructs with at least a near match to this transcript

This list includes shRNAs that have at least a >84% (16 of 19 bases) SDR[?] match to the transcript NM_010345.4, regardless of what transcript they were originally designed to target. For example, this list can include shRNAs that were originally designed to target: (i) a different isoform or obsolete version of this transcript (as annotated by NCBI), (ii) a transcript of an orthologous gene (in this collection, generally human-to-mouse or mouse-to-human), or (iii) a transcript of a different gene (from the same or different taxon). NOTE: this download is a superset of the above result set.

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All ORF constructs matching this transcript

No results found.