Transcript: Mouse NM_010720.3

Mus musculus lipase, endothelial (Lipg), mRNA.

Source:
NCBI, updated 2017-05-21
Taxon:
Mus musculus (mouse)
Gene:
Lipg (16891)
Length:
3787
CDS:
290..1792

Additional Resources:

NCBI RefSeq record:
NM_010720.3
NBCI Gene record:
Lipg (16891)

sgRNA constructs matching this transcript (CRISPRko, NGG PAM)

This list includes CRISPRko constructs with 100% (20mer + NGG) sequence match to the coding regions of this transcript.

No results found.

shRNA constructs matching this transcript with 100% SDR[?] match

This list includes all shRNAs that have a perfect SDR[?] match to Mouse NM_010720.3, regardless of what transcript they were originally designed to target. For example, this list can include shRNAs that were originally designed to target: (i) a different isoform or obsolete version of this transcript (as annotated by NCBI), (ii) a transcript of an orthologous gene (in this collection, generally human-to-mouse or mouse-to-human), or (iii) a transcript of a different gene (from the same or different taxon).

Clone ID Target Seq Vector Match Position Match Region[?] SDR Match %[?] Intrinsic Score[?] Adjusted Score[?] Matches Other Mouse Gene?[?] Orig. Target Gene[?] Addgene[?]
1 TRCN0000178770 CCGGAAGAACCGTTGTAATAA pLKO.1 1222 CDS 100% 15.000 21.000 N Lipg n/a
2 TRCN0000249108 CTGCGAGATGAGCATCATAAA pLKO_005 380 CDS 100% 13.200 18.480 N Lipg n/a
3 TRCN0000257832 TGCCGGAAGAACCGTTGTAAT pLKO_005 1220 CDS 100% 13.200 18.480 N Lipg n/a
4 TRCN0000249106 TTGCGTGTGTGCCGCCTAATT pLKO_005 2930 3UTR 100% 13.200 18.480 N Lipg n/a
5 TRCN0000195890 CGATCTCTTGAAGATGCGACT pLKO.1 1510 CDS 100% 2.160 3.024 N Lipg n/a
6 TRCN0000249105 TACACGGATGCAGTCAATAAC pLKO_005 680 CDS 100% 13.200 9.240 N Lipg n/a
7 TRCN0000249107 CTGGATACGCTGGCAACTTTG pLKO_005 813 CDS 100% 10.800 7.560 N Lipg n/a
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shRNA constructs with at least a near match to this transcript

This list includes shRNAs that have at least a >84% (16 of 19 bases) SDR[?] match to the transcript NM_010720.3, regardless of what transcript they were originally designed to target. For example, this list can include shRNAs that were originally designed to target: (i) a different isoform or obsolete version of this transcript (as annotated by NCBI), (ii) a transcript of an orthologous gene (in this collection, generally human-to-mouse or mouse-to-human), or (iii) a transcript of a different gene (from the same or different taxon). NOTE: this download is a superset of the above result set.

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All ORF constructs matching this transcript

No results found.