Transcript: Mouse NM_011391.1

Mus musculus solute carrier family 16 (monocarboxylic acid transporters), member 7 (Slc16a7), mRNA.

Source:
NCBI, updated 2017-05-13
Taxon:
Mus musculus (mouse)
Gene:
Slc16a7 (20503)
Length:
2422
CDS:
438..1892

Additional Resources:

NCBI RefSeq record:
NM_011391.1
NBCI Gene record:
Slc16a7 (20503)

sgRNA constructs matching this transcript (CRISPRko, NGG PAM)

This list includes CRISPRko constructs with 100% (20mer + NGG) sequence match to the coding regions of this transcript.

No results found.

shRNA constructs matching this transcript with 100% SDR[?] match

This list includes all shRNAs that have a perfect SDR[?] match to Mouse NM_011391.1, regardless of what transcript they were originally designed to target. For example, this list can include shRNAs that were originally designed to target: (i) a different isoform or obsolete version of this transcript (as annotated by NCBI), (ii) a transcript of an orthologous gene (in this collection, generally human-to-mouse or mouse-to-human), or (iii) a transcript of a different gene (from the same or different taxon).

Clone ID Target Seq Vector Match Position Match Region[?] SDR Match %[?] Intrinsic Score[?] Adjusted Score[?] Matches Other Mouse Gene?[?] Orig. Target Gene[?] Addgene[?]
1 TRCN0000079572 GCTGGTAAATTGCTTGATATA pLKO.1 1611 CDS 100% 13.200 18.480 N Slc16a7 n/a
2 TRCN0000079570 CGCTTGGATATCGTCCATCAT pLKO.1 614 CDS 100% 4.950 6.930 N Slc16a7 n/a
3 TRCN0000079568 CGCACCTGAGTTGTGATGAAA pLKO.1 2127 3UTR 100% 5.625 3.938 N Slc16a7 n/a
4 TRCN0000079569 CGTGTTAGTATCAGGTACTTA pLKO.1 1673 CDS 100% 5.625 3.938 N Slc16a7 n/a
5 TRCN0000079571 GTCTCCTCTTTGAATGCCTTA pLKO.1 1501 CDS 100% 4.050 2.835 N Slc16a7 n/a
6 TRCN0000038506 GCTCCTTTCAATCAGTACCTT pLKO.1 924 CDS 100% 3.000 4.200 N SLC16A7 n/a
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shRNA constructs with at least a near match to this transcript

This list includes shRNAs that have at least a >84% (16 of 19 bases) SDR[?] match to the transcript NM_011391.1, regardless of what transcript they were originally designed to target. For example, this list can include shRNAs that were originally designed to target: (i) a different isoform or obsolete version of this transcript (as annotated by NCBI), (ii) a transcript of an orthologous gene (in this collection, generally human-to-mouse or mouse-to-human), or (iii) a transcript of a different gene (from the same or different taxon). NOTE: this download is a superset of the above result set.

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All ORF constructs matching this transcript

No results found.