Transcript: Human NM_032119.4

Homo sapiens adhesion G protein-coupled receptor V1 (ADGRV1), transcript variant 1, mRNA.

Source:
NCBI, updated 2019-08-07
Taxon:
Homo sapiens (human)
Gene:
ADGRV1 (84059)
Length:
19557
CDS:
100..19020

Additional Resources:

NCBI RefSeq record:
NM_032119.4
NBCI Gene record:
ADGRV1 (84059)

sgRNA constructs matching this transcript (CRISPRko, NGG PAM)

This list includes CRISPRko constructs with 100% (20mer + NGG) sequence match to the coding regions of this transcript.

No results found.

shRNA constructs matching this transcript with 100% SDR[?] match

This list includes all shRNAs that have a perfect SDR[?] match to Human NM_032119.4, regardless of what transcript they were originally designed to target. For example, this list can include shRNAs that were originally designed to target: (i) a different isoform or obsolete version of this transcript (as annotated by NCBI), (ii) a transcript of an orthologous gene (in this collection, generally human-to-mouse or mouse-to-human), or (iii) a transcript of a different gene (from the same or different taxon).

Clone ID Target Seq Vector Match Position Match Region[?] SDR Match %[?] Intrinsic Score[?] Adjusted Score[?] Matches Other Human Gene?[?] Orig. Target Gene[?] Addgene[?]
1 TRCN0000358235 ATACTAGCCGTGACCTAATTA pLKO_005 2375 CDS 100% 15.000 21.000 N ADGRV1 n/a
2 TRCN0000368559 TCGAACTAATGGCATTGATTT pLKO_005 9777 CDS 100% 13.200 18.480 N ADGRV1 n/a
3 TRCN0000014233 GAGCACACTTTCATATTTGTA pLKO.1 19042 3UTR 100% 5.625 7.875 N ADGRV1 n/a
4 TRCN0000014234 CGGATTTGAATCCACTGCTTT pLKO.1 14763 CDS 100% 4.950 3.960 N ADGRV1 n/a
5 TRCN0000358234 TCGATTCAAGGCCCTACAAAT pLKO_005 9537 CDS 100% 13.200 9.240 N ADGRV1 n/a
6 TRCN0000014237 CCTGCCAATGATGATCCTTAT pLKO.1 7126 CDS 100% 10.800 7.560 N ADGRV1 n/a
7 TRCN0000014236 GCCAAGAGATAGCAATGAATT pLKO.1 2544 CDS 100% 0.000 0.000 N ADGRV1 n/a
8 TRCN0000014235 CCCAGGAGTTTGATGATTTAA pLKO.1 18863 CDS 100% 15.000 9.000 N ADGRV1 n/a
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shRNA constructs with at least a near match to this transcript

This list includes shRNAs that have at least a >84% (16 of 19 bases) SDR[?] match to the transcript NM_032119.4, regardless of what transcript they were originally designed to target. For example, this list can include shRNAs that were originally designed to target: (i) a different isoform or obsolete version of this transcript (as annotated by NCBI), (ii) a transcript of an orthologous gene (in this collection, generally human-to-mouse or mouse-to-human), or (iii) a transcript of a different gene (from the same or different taxon). NOTE: this download is a superset of the above result set.

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All ORF constructs matching this transcript

No results found.