Transcript: Human NM_032173.3

Homo sapiens zinc and ring finger 3 (ZNRF3), transcript variant 2, mRNA.

Source:
NCBI, updated 2019-08-07
Taxon:
Homo sapiens (human)
Gene:
ZNRF3 (84133)
Length:
6489
CDS:
94..2604

Additional Resources:

NCBI RefSeq record:
NM_032173.3
NBCI Gene record:
ZNRF3 (84133)

sgRNA constructs matching this transcript (CRISPRko, NGG PAM)

This list includes CRISPRko constructs with 100% (20mer + NGG) sequence match to the coding regions of this transcript.

No results found.

shRNA constructs matching this transcript with 100% SDR[?] match

This list includes all shRNAs that have a perfect SDR[?] match to Human NM_032173.3, regardless of what transcript they were originally designed to target. For example, this list can include shRNAs that were originally designed to target: (i) a different isoform or obsolete version of this transcript (as annotated by NCBI), (ii) a transcript of an orthologous gene (in this collection, generally human-to-mouse or mouse-to-human), or (iii) a transcript of a different gene (from the same or different taxon).

Clone ID Target Seq Vector Match Position Match Region[?] SDR Match %[?] Intrinsic Score[?] Adjusted Score[?] Matches Other Human Gene?[?] Orig. Target Gene[?] Addgene[?]
1 TRCN0000253789 GTCTACCTAATGCACTATTAT pLKO_005 3922 3UTR 100% 15.000 21.000 N ZNRF3 n/a
2 TRCN0000253787 TCCTCGACAACCCACTGAATA pLKO_005 420 CDS 100% 13.200 10.560 N ZNRF3 n/a
3 TRCN0000253788 GAAGGGTGCAGATGCCATTAA pLKO_005 342 CDS 100% 13.200 9.240 N ZNRF3 n/a
4 TRCN0000253790 ACTGTCGGCACAACATCATAG pLKO_005 788 CDS 100% 10.800 7.560 N ZNRF3 n/a
5 TRCN0000253791 ATGACGAAGAGGACTTGTATG pLKO_005 122 CDS 100% 10.800 7.560 N ZNRF3 n/a
6 TRCN0000155836 CCCAAAGTGCTGGGATTACAA pLKO.1 5340 3UTR 100% 5.625 2.813 Y KLHL30 n/a
7 TRCN0000141025 CCCAAAGTGCTGGGATTACTT pLKO.1 5340 3UTR 100% 5.625 2.813 Y EID2B n/a
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shRNA constructs with at least a near match to this transcript

This list includes shRNAs that have at least a >84% (16 of 19 bases) SDR[?] match to the transcript NM_032173.3, regardless of what transcript they were originally designed to target. For example, this list can include shRNAs that were originally designed to target: (i) a different isoform or obsolete version of this transcript (as annotated by NCBI), (ii) a transcript of an orthologous gene (in this collection, generally human-to-mouse or mouse-to-human), or (iii) a transcript of a different gene (from the same or different taxon). NOTE: this download is a superset of the above result set.

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All ORF constructs matching this transcript

No results found.