Transcript: Human NM_033054.3

Homo sapiens myosin IG (MYO1G), mRNA.

Source:
NCBI, updated 2019-08-07
Taxon:
Homo sapiens (human)
Gene:
MYO1G (64005)
Length:
3188
CDS:
55..3111

Additional Resources:

NCBI RefSeq record:
NM_033054.3
NBCI Gene record:
MYO1G (64005)

sgRNA constructs matching this transcript (CRISPRko, NGG PAM)

This list includes CRISPRko constructs with 100% (20mer + NGG) sequence match to the coding regions of this transcript.

No results found.

shRNA constructs matching this transcript with 100% SDR[?] match

This list includes all shRNAs that have a perfect SDR[?] match to Human NM_033054.3, regardless of what transcript they were originally designed to target. For example, this list can include shRNAs that were originally designed to target: (i) a different isoform or obsolete version of this transcript (as annotated by NCBI), (ii) a transcript of an orthologous gene (in this collection, generally human-to-mouse or mouse-to-human), or (iii) a transcript of a different gene (from the same or different taxon).

Clone ID Target Seq Vector Match Position Match Region[?] SDR Match %[?] Intrinsic Score[?] Adjusted Score[?] Matches Other Human Gene?[?] Orig. Target Gene[?] Addgene[?]
1 TRCN0000164476 CCTGTTTGCTCAGCGACTAAA pLKO.1 2607 CDS 100% 13.200 18.480 N MYO1G n/a
2 TRCN0000161966 GCAGAGCGTTGAGTATTTCAA pLKO.1 1380 CDS 100% 5.625 7.875 N MYO1G n/a
3 TRCN0000423790 TGTCCTCTGCCACTGACAATC pLKO_005 2573 CDS 100% 10.800 7.560 N MYO1G n/a
4 TRCN0000439206 ACCATCACTGACCGAATCTTC pLKO_005 1483 CDS 100% 4.950 3.465 N MYO1G n/a
5 TRCN0000161366 GAACAGGATCAACAGTGTCAT pLKO.1 1158 CDS 100% 4.950 3.465 N MYO1G n/a
6 TRCN0000160913 GCAAACCTGACTTTGTGCTTT pLKO.1 83 CDS 100% 4.950 3.465 N MYO1G n/a
7 TRCN0000163316 GCTCAGCGACTAAAGACACTT pLKO.1 2614 CDS 100% 4.950 3.465 N MYO1G n/a
8 TRCN0000162863 GCAGCTATTCATCCAGCTCAT pLKO.1 1314 CDS 100% 4.050 2.835 N MYO1G n/a
9 TRCN0000163315 GAGGGCTATCTACACCATCAT pLKO.1 2253 CDS 100% 4.950 2.970 N MYO1G n/a
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shRNA constructs with at least a near match to this transcript

This list includes shRNAs that have at least a >84% (16 of 19 bases) SDR[?] match to the transcript NM_033054.3, regardless of what transcript they were originally designed to target. For example, this list can include shRNAs that were originally designed to target: (i) a different isoform or obsolete version of this transcript (as annotated by NCBI), (ii) a transcript of an orthologous gene (in this collection, generally human-to-mouse or mouse-to-human), or (iii) a transcript of a different gene (from the same or different taxon). NOTE: this download is a superset of the above result set.

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All ORF constructs matching this transcript

No results found.