Transcript: Mouse NM_033374.3

Mus musculus dedicator of cyto-kinesis 2 (Dock2), mRNA.

Source:
NCBI, updated 2017-04-23
Taxon:
Mus musculus (mouse)
Gene:
Dock2 (94176)
Length:
6431
CDS:
83..5569

Additional Resources:

NCBI RefSeq record:
NM_033374.3
NBCI Gene record:
Dock2 (94176)

sgRNA constructs matching this transcript (CRISPRko, NGG PAM)

This list includes CRISPRko constructs with 100% (20mer + NGG) sequence match to the coding regions of this transcript.

No results found.

shRNA constructs matching this transcript with 100% SDR[?] match

This list includes all shRNAs that have a perfect SDR[?] match to Mouse NM_033374.3, regardless of what transcript they were originally designed to target. For example, this list can include shRNAs that were originally designed to target: (i) a different isoform or obsolete version of this transcript (as annotated by NCBI), (ii) a transcript of an orthologous gene (in this collection, generally human-to-mouse or mouse-to-human), or (iii) a transcript of a different gene (from the same or different taxon).

Clone ID Target Seq Vector Match Position Match Region[?] SDR Match %[?] Intrinsic Score[?] Adjusted Score[?] Matches Other Mouse Gene?[?] Orig. Target Gene[?] Addgene[?]
1 TRCN0000091247 CGAGTATGACATCCTCGTCTT pLKO.1 2083 CDS 100% 4.050 5.670 N Dock2 n/a
2 TRCN0000091246 CGACGAAGAGAAGCAACATTT pLKO.1 1102 CDS 100% 13.200 9.240 N Dock2 n/a
3 TRCN0000091245 GCGACGAAGAGAAGCAACATT pLKO.1 1101 CDS 100% 5.625 3.938 N Dock2 n/a
4 TRCN0000091244 CCTATATTAGAGATGACACTT pLKO.1 3350 CDS 100% 4.950 3.465 N Dock2 n/a
5 TRCN0000091243 CGAGACTATGTCCACAGTCAA pLKO.1 4576 CDS 100% 4.950 3.465 N Dock2 n/a
Download CSV

shRNA constructs with at least a near match to this transcript

This list includes shRNAs that have at least a >84% (16 of 19 bases) SDR[?] match to the transcript NM_033374.3, regardless of what transcript they were originally designed to target. For example, this list can include shRNAs that were originally designed to target: (i) a different isoform or obsolete version of this transcript (as annotated by NCBI), (ii) a transcript of an orthologous gene (in this collection, generally human-to-mouse or mouse-to-human), or (iii) a transcript of a different gene (from the same or different taxon). NOTE: this download is a superset of the above result set.

Download CSV

All ORF constructs matching this transcript

No results found.