Transcript: Human NM_054027.6

Homo sapiens ANKH inorganic pyrophosphate transport regulator (ANKH), mRNA.

Source:
NCBI, updated 2019-08-07
Taxon:
Homo sapiens (human)
Gene:
ANKH (56172)
Length:
8207
CDS:
332..1810

Additional Resources:

NCBI RefSeq record:
NM_054027.6
NBCI Gene record:
ANKH (56172)

sgRNA constructs matching this transcript (CRISPRko, NGG PAM)

This list includes CRISPRko constructs with 100% (20mer + NGG) sequence match to the coding regions of this transcript.

No results found.

shRNA constructs matching this transcript with 100% SDR[?] match

This list includes all shRNAs that have a perfect SDR[?] match to Human NM_054027.6, regardless of what transcript they were originally designed to target. For example, this list can include shRNAs that were originally designed to target: (i) a different isoform or obsolete version of this transcript (as annotated by NCBI), (ii) a transcript of an orthologous gene (in this collection, generally human-to-mouse or mouse-to-human), or (iii) a transcript of a different gene (from the same or different taxon).

Clone ID Target Seq Vector Match Position Match Region[?] SDR Match %[?] Intrinsic Score[?] Adjusted Score[?] Matches Other Human Gene?[?] Orig. Target Gene[?] Addgene[?]
1 TRCN0000059323 CGGCCTATTGTCAACCTCTTT pLKO.1 1094 CDS 100% 4.950 6.930 N ANKH n/a
2 TRCN0000422372 GGTGGCCTTTGGCTCTAATTC pLKO_005 1053 CDS 100% 13.200 10.560 N ANKH n/a
3 TRCN0000422508 CAGTCACATGGCCGTACAAAG pLKO_005 2264 3UTR 100% 10.800 8.640 N ANKH n/a
4 TRCN0000436436 CCTCAATCTCAGATGTCATAG pLKO_005 822 CDS 100% 10.800 8.640 N ANKH n/a
5 TRCN0000418913 GGACCTAGTGAATGGTCTTTA pLKO_005 1993 3UTR 100% 13.200 9.240 N ANKH n/a
6 TRCN0000059326 ACGCTCTGTTTCGTGATGTTT pLKO.1 1340 CDS 100% 5.625 3.938 N ANKH n/a
7 TRCN0000059327 CACTGATAGCTTATAGTGATT pLKO.1 636 CDS 100% 4.950 3.465 N ANKH n/a
8 TRCN0000059324 CCTGGGCTACTACAAGAACAT pLKO.1 958 CDS 100% 4.950 3.465 N ANKH n/a
9 TRCN0000098166 GCCTCAATCTCAGATGTCATA pLKO.1 821 CDS 100% 4.950 3.465 N Ank n/a
10 TRCN0000316428 GCCTCAATCTCAGATGTCATA pLKO_005 821 CDS 100% 4.950 3.465 N Ank n/a
11 TRCN0000059325 CTTTCCTTTCATGGACGCAAT pLKO.1 742 CDS 100% 4.050 2.835 N ANKH n/a
12 TRCN0000417047 CCCATGCTGGCATTCTCTTAA pLKO_005 771 CDS 100% 13.200 7.920 N ANKH n/a
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shRNA constructs with at least a near match to this transcript

This list includes shRNAs that have at least a >84% (16 of 19 bases) SDR[?] match to the transcript NM_054027.6, regardless of what transcript they were originally designed to target. For example, this list can include shRNAs that were originally designed to target: (i) a different isoform or obsolete version of this transcript (as annotated by NCBI), (ii) a transcript of an orthologous gene (in this collection, generally human-to-mouse or mouse-to-human), or (iii) a transcript of a different gene (from the same or different taxon). NOTE: this download is a superset of the above result set.

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All ORF constructs matching this transcript

No results found.