Transcript: Mouse NM_146232.1

Mus musculus solute carrier family 22 (organic cation transporter), member 26 (Slc22a26), mRNA.

Source:
NCBI, updated 2015-02-15
Taxon:
Mus musculus (mouse)
Gene:
Slc22a26 (236149)
Length:
2016
CDS:
219..1877

Additional Resources:

NCBI RefSeq record:
NM_146232.1
NBCI Gene record:
Slc22a26 (236149)

sgRNA constructs matching this transcript (CRISPRko, NGG PAM)

This list includes CRISPRko constructs with 100% (20mer + NGG) sequence match to the coding regions of this transcript.

No results found.

shRNA constructs matching this transcript with 100% SDR[?] match

This list includes all shRNAs that have a perfect SDR[?] match to Mouse NM_146232.1, regardless of what transcript they were originally designed to target. For example, this list can include shRNAs that were originally designed to target: (i) a different isoform or obsolete version of this transcript (as annotated by NCBI), (ii) a transcript of an orthologous gene (in this collection, generally human-to-mouse or mouse-to-human), or (iii) a transcript of a different gene (from the same or different taxon).

Clone ID Target Seq Vector Match Position Match Region[?] SDR Match %[?] Intrinsic Score[?] Adjusted Score[?] Matches Other Mouse Gene?[?] Orig. Target Gene[?] Addgene[?]
1 TRCN0000102202 GCTTTGTATCATACCCATAAA pLKO.1 839 CDS 100% 13.200 9.240 N Slc22a26 n/a
2 TRCN0000102201 CCAAAGTCTTACTTCTGCATT pLKO.1 1361 CDS 100% 4.950 3.465 N Slc22a26 n/a
3 TRCN0000102200 CCGTAGAATAAGTCAACTCTT pLKO.1 1430 CDS 100% 4.950 3.465 N Slc22a26 n/a
4 TRCN0000102204 CTCTAATAATAACAGTGGGAT pLKO.1 395 CDS 100% 2.640 1.848 N Slc22a26 n/a
5 TRCN0000102203 GCCCTGTTTGCTGTTTGGAAT pLKO.1 1451 CDS 100% 4.950 2.970 N Slc22a26 n/a
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shRNA constructs with at least a near match to this transcript

This list includes shRNAs that have at least a >84% (16 of 19 bases) SDR[?] match to the transcript NM_146232.1, regardless of what transcript they were originally designed to target. For example, this list can include shRNAs that were originally designed to target: (i) a different isoform or obsolete version of this transcript (as annotated by NCBI), (ii) a transcript of an orthologous gene (in this collection, generally human-to-mouse or mouse-to-human), or (iii) a transcript of a different gene (from the same or different taxon). NOTE: this download is a superset of the above result set.

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All ORF constructs matching this transcript

No results found.