Transcript: Human NM_152793.3

Homo sapiens maturin, neural progenitor differentiation regulator homolog (MTURN), mRNA.

Source:
NCBI, updated 2019-05-02
Taxon:
Homo sapiens (human)
Gene:
MTURN (222166)
Length:
5761
CDS:
152..547

Additional Resources:

NCBI RefSeq record:
NM_152793.3
NBCI Gene record:
MTURN (222166)

sgRNA constructs matching this transcript (CRISPRko, NGG PAM)

This list includes CRISPRko constructs with 100% (20mer + NGG) sequence match to the coding regions of this transcript.

No results found.

shRNA constructs matching this transcript with 100% SDR[?] match

This list includes all shRNAs that have a perfect SDR[?] match to Human NM_152793.3, regardless of what transcript they were originally designed to target. For example, this list can include shRNAs that were originally designed to target: (i) a different isoform or obsolete version of this transcript (as annotated by NCBI), (ii) a transcript of an orthologous gene (in this collection, generally human-to-mouse or mouse-to-human), or (iii) a transcript of a different gene (from the same or different taxon).

Clone ID Target Seq Vector Match Position Match Region[?] SDR Match %[?] Intrinsic Score[?] Adjusted Score[?] Matches Other Human Gene?[?] Orig. Target Gene[?] Addgene[?]
1 TRCN0000422922 GCTCCCAGCATCCAAATTAAA pLKO_005 656 3UTR 100% 15.000 21.000 N MTURN n/a
2 TRCN0000425116 TTGCATTAGCACTTCGAAATA pLKO_005 626 3UTR 100% 13.200 18.480 N MTURN n/a
3 TRCN0000447249 GACCGAACGCAGGATGGATTT pLKO_005 229 CDS 100% 10.800 15.120 N MTURN n/a
4 TRCN0000131166 GATGCAGATGACGATGCGTTT pLKO.1 452 CDS 100% 4.050 5.670 N MTURN n/a
5 TRCN0000127625 CCGCTTAAACTTTGAAGCCAT pLKO.1 1400 3UTR 100% 2.640 3.696 N MTURN n/a
6 TRCN0000424425 CTGACTATTCTCTTAAGTTTA pLKO_005 820 3UTR 100% 13.200 10.560 N MTURN n/a
7 TRCN0000128531 CCTCCTTTACAACACTAGATT pLKO.1 1833 3UTR 100% 5.625 3.938 N MTURN n/a
8 TRCN0000131165 GCAGCTAGCACAGGATTACAT pLKO.1 352 CDS 100% 5.625 3.938 N MTURN n/a
9 TRCN0000130924 CACAGGATTACATCTCCTCCT pLKO.1 360 CDS 100% 2.160 1.512 N MTURN n/a
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shRNA constructs with at least a near match to this transcript

This list includes shRNAs that have at least a >84% (16 of 19 bases) SDR[?] match to the transcript NM_152793.3, regardless of what transcript they were originally designed to target. For example, this list can include shRNAs that were originally designed to target: (i) a different isoform or obsolete version of this transcript (as annotated by NCBI), (ii) a transcript of an orthologous gene (in this collection, generally human-to-mouse or mouse-to-human), or (iii) a transcript of a different gene (from the same or different taxon). NOTE: this download is a superset of the above result set.

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All ORF constructs matching this transcript

No results found.