Transcript: Human NM_152860.2

Homo sapiens Sp7 transcription factor (SP7), transcript variant 2, mRNA.

Source:
NCBI, updated 2019-09-28
Taxon:
Homo sapiens (human)
Gene:
SP7 (121340)
Length:
2997
CDS:
131..1426

Additional Resources:

NCBI RefSeq record:
NM_152860.2
NBCI Gene record:
SP7 (121340)

sgRNA constructs matching this transcript (CRISPRko, NGG PAM)

This list includes CRISPRko constructs with 100% (20mer + NGG) sequence match to the coding regions of this transcript.

No results found.

shRNA constructs matching this transcript with 100% SDR[?] match

This list includes all shRNAs that have a perfect SDR[?] match to Human NM_152860.2, regardless of what transcript they were originally designed to target. For example, this list can include shRNAs that were originally designed to target: (i) a different isoform or obsolete version of this transcript (as annotated by NCBI), (ii) a transcript of an orthologous gene (in this collection, generally human-to-mouse or mouse-to-human), or (iii) a transcript of a different gene (from the same or different taxon).

Clone ID Target Seq Vector Match Position Match Region[?] SDR Match %[?] Intrinsic Score[?] Adjusted Score[?] Matches Other Human Gene?[?] Orig. Target Gene[?] Addgene[?]
1 TRCN0000021006 GCTAATGATTACCCTCCCTTT pLKO.1 395 CDS 100% 4.050 5.670 N SP7 n/a
2 TRCN0000021007 ACAAGCACTAATGGGCTCCTT pLKO.1 335 CDS 100% 2.640 2.112 N SP7 n/a
3 TRCN0000425503 TTCTGCTTCTCAAGCTTATTT pLKO_005 1775 3UTR 100% 15.000 10.500 N SP7 n/a
4 TRCN0000425548 CCTACTCCATGGTGGGATATG pLKO_005 593 CDS 100% 10.800 7.560 N SP7 n/a
5 TRCN0000021004 CCTCAGGCTATGCTAATGATT pLKO.1 384 CDS 100% 5.625 3.938 N SP7 n/a
6 TRCN0000021005 GCAGCAAATTTGGTGGCTCTA pLKO.1 201 CDS 100% 4.050 2.835 N SP7 n/a
7 TRCN0000021008 CCCAAGATGTCTATAAACCCA pLKO.1 804 CDS 100% 0.750 0.525 N SP7 n/a
8 TRCN0000429222 AGGCATCCATGCAGGCATTTC pLKO_005 553 CDS 100% 10.800 6.480 N SP7 n/a
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shRNA constructs with at least a near match to this transcript

This list includes shRNAs that have at least a >84% (16 of 19 bases) SDR[?] match to the transcript NM_152860.2, regardless of what transcript they were originally designed to target. For example, this list can include shRNAs that were originally designed to target: (i) a different isoform or obsolete version of this transcript (as annotated by NCBI), (ii) a transcript of an orthologous gene (in this collection, generally human-to-mouse or mouse-to-human), or (iii) a transcript of a different gene (from the same or different taxon). NOTE: this download is a superset of the above result set.

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All ORF constructs matching this transcript

No results found.