Transcript: Mouse NM_182841.1

Mus musculus transmembrane protein 150C (Tmem150c), mRNA.

Source:
NCBI, updated 2017-05-13
Taxon:
Mus musculus (mouse)
Gene:
Tmem150c (231503)
Length:
3100
CDS:
354..1103

Additional Resources:

NCBI RefSeq record:
NM_182841.1
NBCI Gene record:
Tmem150c (231503)

sgRNA constructs matching this transcript (CRISPRko, NGG PAM)

This list includes CRISPRko constructs with 100% (20mer + NGG) sequence match to the coding regions of this transcript.

No results found.

shRNA constructs matching this transcript with 100% SDR[?] match

This list includes all shRNAs that have a perfect SDR[?] match to Mouse NM_182841.1, regardless of what transcript they were originally designed to target. For example, this list can include shRNAs that were originally designed to target: (i) a different isoform or obsolete version of this transcript (as annotated by NCBI), (ii) a transcript of an orthologous gene (in this collection, generally human-to-mouse or mouse-to-human), or (iii) a transcript of a different gene (from the same or different taxon).

Clone ID Target Seq Vector Match Position Match Region[?] SDR Match %[?] Intrinsic Score[?] Adjusted Score[?] Matches Other Mouse Gene?[?] Orig. Target Gene[?] Addgene[?]
1 TRCN0000176831 GCAGGTTACTTCTTTCTTGAA pLKO.1 1263 3UTR 100% 4.950 6.930 N Tmem150c n/a
2 TRCN0000182255 CCCTGAAGTATAGCTTCCCAA pLKO.1 2523 3UTR 100% 2.640 3.696 N Tmem150c n/a
3 TRCN0000197835 GAATGACCTTACTTGGTAATT pLKO.1 691 CDS 100% 13.200 9.240 N Tmem150c n/a
4 TRCN0000176991 GCTTGTGGATAGTGTACTTTA pLKO.1 421 CDS 100% 13.200 9.240 N Tmem150c n/a
5 TRCN0000197819 GCACACAGTAAATGTCCAAAT pLKO.1 2595 3UTR 100% 10.800 7.560 N Tmem150c n/a
6 TRCN0000182591 GCCTGTCAGAAGCTTCTGAAT pLKO.1 1063 CDS 100% 0.495 0.347 N Tmem150c n/a
7 TRCN0000216881 GTTTCTACCTCTCGTGTTTAC pLKO.1 383 CDS 100% 10.800 6.480 N Tmem150c n/a
8 TRCN0000269204 TAGCTGTTCTGCGCTTCATAC pLKO_005 598 CDS 100% 10.800 7.560 N TMEM150C n/a
9 TRCN0000166364 CACACACACACACACACACAA pLKO.1 1201 3UTR 100% 4.950 2.475 Y KAAG1 n/a
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shRNA constructs with at least a near match to this transcript

This list includes shRNAs that have at least a >84% (16 of 19 bases) SDR[?] match to the transcript NM_182841.1, regardless of what transcript they were originally designed to target. For example, this list can include shRNAs that were originally designed to target: (i) a different isoform or obsolete version of this transcript (as annotated by NCBI), (ii) a transcript of an orthologous gene (in this collection, generally human-to-mouse or mouse-to-human), or (iii) a transcript of a different gene (from the same or different taxon). NOTE: this download is a superset of the above result set.

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All ORF constructs matching this transcript

No results found.