Transcript: Mouse NM_198171.2

Mus musculus carboxyesterase 2B (Ces2b), mRNA.

Source:
NCBI, updated 2015-02-15
Taxon:
Mus musculus (mouse)
Gene:
Ces2b (234669)
Length:
1912
CDS:
29..1699

Additional Resources:

NCBI RefSeq record:
NM_198171.2
NBCI Gene record:
Ces2b (234669)

sgRNA constructs matching this transcript (CRISPRko, NGG PAM)

This list includes CRISPRko constructs with 100% (20mer + NGG) sequence match to the coding regions of this transcript.

No results found.

shRNA constructs matching this transcript with 100% SDR[?] match

This list includes all shRNAs that have a perfect SDR[?] match to Mouse NM_198171.2, regardless of what transcript they were originally designed to target. For example, this list can include shRNAs that were originally designed to target: (i) a different isoform or obsolete version of this transcript (as annotated by NCBI), (ii) a transcript of an orthologous gene (in this collection, generally human-to-mouse or mouse-to-human), or (iii) a transcript of a different gene (from the same or different taxon).

Clone ID Target Seq Vector Match Position Match Region[?] SDR Match %[?] Intrinsic Score[?] Adjusted Score[?] Matches Other Mouse Gene?[?] Orig. Target Gene[?] Addgene[?]
1 TRCN0000111013 CGATGAGTTTGGTTGGACCAT pLKO.1 1048 CDS 100% 2.640 3.696 N Ces2b n/a
2 TRCN0000111010 GCGTTACAAAGTCCATTTATT pLKO.1 1741 3UTR 100% 15.000 10.500 N Ces2b n/a
3 TRCN0000431376 GGCTGGATGTTCTCCTCTTTG pLKO_005 54 CDS 100% 10.800 7.560 N Ces2b n/a
4 TRCN0000111012 CATGGGCTCTGCTCAAACAAT pLKO.1 1078 CDS 100% 5.625 3.938 N Ces2b n/a
5 TRCN0000435051 AGGACTTGGTGGTGGTCACTA pLKO_005 522 CDS 100% 4.950 3.465 N Ces2b n/a
6 TRCN0000416706 TAACAAGCTTGTCCAGATGAT pLKO_005 928 CDS 100% 4.950 3.465 N Ces2b n/a
7 TRCN0000111014 TGGATCTCTATTGGCAGCCAT pLKO.1 499 CDS 100% 2.640 1.848 N Ces2b n/a
8 TRCN0000111011 TCTGGGTGTAATGAAGGAGAT pLKO.1 328 CDS 100% 4.050 2.430 N Ces2b n/a
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shRNA constructs with at least a near match to this transcript

This list includes shRNAs that have at least a >84% (16 of 19 bases) SDR[?] match to the transcript NM_198171.2, regardless of what transcript they were originally designed to target. For example, this list can include shRNAs that were originally designed to target: (i) a different isoform or obsolete version of this transcript (as annotated by NCBI), (ii) a transcript of an orthologous gene (in this collection, generally human-to-mouse or mouse-to-human), or (iii) a transcript of a different gene (from the same or different taxon). NOTE: this download is a superset of the above result set.

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All ORF constructs matching this transcript

No results found.