Transcript: Human NR_031766.3

Homo sapiens tescalcin (TESC), transcript variant 3, non-coding RNA.

Source:
NCBI, updated 2019-08-27
Taxon:
Homo sapiens (human)
Gene:
TESC (54997)
Length:
994
CDS:
(non-coding)

Additional Resources:

NCBI RefSeq record:
NR_031766.3
NBCI Gene record:
TESC (54997)

sgRNA constructs matching this transcript (CRISPRko, NGG PAM)

This list includes CRISPRko constructs with 100% (20mer + NGG) sequence match to the exonic sequence of this non-coding transcript.

No results found.

shRNA constructs matching this transcript with 100% SDR[?] match

This list includes all shRNAs that have a perfect SDR[?] match to Human NR_031766.3, regardless of what transcript they were originally designed to target. For example, this list can include shRNAs that were originally designed to target: (i) a different isoform or obsolete version of this transcript (as annotated by NCBI), (ii) a transcript of an orthologous gene (in this collection, generally human-to-mouse or mouse-to-human), or (iii) a transcript of a different gene (from the same or different taxon).

Clone ID Target Seq Vector Match Position Match Region[?] SDR Match %[?] Intrinsic Score[?] Adjusted Score[?] Matches Other Human Gene?[?] Orig. Target Gene[?] Addgene[?]
1 TRCN0000055810 GCAGCTCCATCGGAGATTTAA pLKO.1 212 3UTR 100% 15.000 10.500 N TESC n/a
2 TRCN0000299767 GCAGCTCCATCGGAGATTTAA pLKO_005 212 3UTR 100% 15.000 10.500 N TESC n/a
3 TRCN0000055808 CCTGGCTGATGAGATCAATTT pLKO.1 368 3UTR 100% 13.200 9.240 N TESC n/a
4 TRCN0000299837 CCTGGCTGATGAGATCAATTT pLKO_005 368 3UTR 100% 13.200 9.240 N TESC n/a
5 TRCN0000055809 CGCATCACTCTGGAAGAATAT pLKO.1 519 3UTR 100% 13.200 9.240 N TESC n/a
6 TRCN0000299840 CGCATCACTCTGGAAGAATAT pLKO_005 519 3UTR 100% 13.200 9.240 N TESC n/a
7 TRCN0000055812 AGTGGAGATCAGCCTACCATT pLKO.1 240 3UTR 100% 4.950 3.465 N TESC n/a
8 TRCN0000299838 AGTGGAGATCAGCCTACCATT pLKO_005 240 3UTR 100% 4.950 3.465 N TESC n/a
9 TRCN0000055811 CCTGACCATCATGTCCTACTT pLKO.1 398 3UTR 100% 4.950 3.465 N TESC n/a
10 TRCN0000299839 CCTGACCATCATGTCCTACTT pLKO_005 398 3UTR 100% 4.950 3.465 N TESC n/a
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shRNA constructs with at least a near match to this transcript

This list includes shRNAs that have at least a >84% (16 of 19 bases) SDR[?] match to the transcript NR_031766.3, regardless of what transcript they were originally designed to target. For example, this list can include shRNAs that were originally designed to target: (i) a different isoform or obsolete version of this transcript (as annotated by NCBI), (ii) a transcript of an orthologous gene (in this collection, generally human-to-mouse or mouse-to-human), or (iii) a transcript of a different gene (from the same or different taxon). NOTE: this download is a superset of the above result set.

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All ORF constructs matching this transcript

No results found.