Transcript: Human NR_126062.1

Homo sapiens CELF2 antisense RNA 1 (CELF2-AS1), long non-coding RNA.

Source:
NCBI, updated 2018-05-24
Taxon:
Homo sapiens (human)
Gene:
CELF2-AS1 (414196)
Length:
2573
CDS:
(non-coding)

Additional Resources:

NCBI RefSeq record:
NR_126062.1
NBCI Gene record:
CELF2-AS1 (414196)

sgRNA constructs matching this transcript (CRISPRko, NGG PAM)

This list includes CRISPRko constructs with 100% (20mer + NGG) sequence match to the exonic sequence of this non-coding transcript.

No results found.

shRNA constructs matching this transcript with 100% SDR[?] match

This list includes all shRNAs that have a perfect SDR[?] match to Human NR_126062.1, regardless of what transcript they were originally designed to target. For example, this list can include shRNAs that were originally designed to target: (i) a different isoform or obsolete version of this transcript (as annotated by NCBI), (ii) a transcript of an orthologous gene (in this collection, generally human-to-mouse or mouse-to-human), or (iii) a transcript of a different gene (from the same or different taxon).

Clone ID Target Seq Vector Match Position Match Region[?] SDR Match %[?] Intrinsic Score[?] Adjusted Score[?] Matches Other Human Gene?[?] Orig. Target Gene[?] Addgene[?]
1 TRCN0000162487 CGACCATTTCCTCTCATTTAT pLKO.1 1448 3UTR 100% 15.000 10.500 N CELF2-AS1 n/a
2 TRCN0000160256 CCTGATGTTGTTCTAGATTAA pLKO.1 1273 3UTR 100% 13.200 9.240 N CELF2-AS1 n/a
3 TRCN0000159022 GTGAAGAAAGTCAAGTTGAAT pLKO.1 1374 3UTR 100% 5.625 3.938 N CELF2-AS1 n/a
4 TRCN0000166119 CAGTCCTCTGGAAATGCAGAT pLKO.1 241 3UTR 100% 4.050 2.835 N CELF2-AS1 n/a
5 TRCN0000163773 GATGGATGTTTCAGAGGGTAT pLKO.1 763 3UTR 100% 4.050 2.835 N CELF2-AS1 n/a
6 TRCN0000163945 CCTGCTCTTGAAATACTGGAT pLKO.1 745 3UTR 100% 2.640 1.848 N CELF2-AS1 n/a
7 TRCN0000163511 GATTACAGATGATCGCACTCT pLKO.1 215 3UTR 100% 2.640 1.848 N CELF2-AS1 n/a
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shRNA constructs with at least a near match to this transcript

This list includes shRNAs that have at least a >84% (16 of 19 bases) SDR[?] match to the transcript NR_126062.1, regardless of what transcript they were originally designed to target. For example, this list can include shRNAs that were originally designed to target: (i) a different isoform or obsolete version of this transcript (as annotated by NCBI), (ii) a transcript of an orthologous gene (in this collection, generally human-to-mouse or mouse-to-human), or (iii) a transcript of a different gene (from the same or different taxon). NOTE: this download is a superset of the above result set.

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All ORF constructs matching this transcript

No results found.