Transcript: Human NR_136752.2

Homo sapiens poly(ADP-ribose) glycohydrolase (PARG), transcript variant 8, non-coding RNA.

Source:
NCBI, updated 2019-05-07
Taxon:
Homo sapiens (human)
Gene:
PARG (8505)
Length:
4034
CDS:
(non-coding)

Additional Resources:

NCBI RefSeq record:
NR_136752.2
NBCI Gene record:
PARG (8505)

sgRNA constructs matching this transcript (CRISPRko, NGG PAM)

This list includes CRISPRko constructs with 100% (20mer + NGG) sequence match to the exonic sequence of this non-coding transcript.

No results found.

shRNA constructs matching this transcript with 100% SDR[?] match

This list includes all shRNAs that have a perfect SDR[?] match to Human NR_136752.2, regardless of what transcript they were originally designed to target. For example, this list can include shRNAs that were originally designed to target: (i) a different isoform or obsolete version of this transcript (as annotated by NCBI), (ii) a transcript of an orthologous gene (in this collection, generally human-to-mouse or mouse-to-human), or (iii) a transcript of a different gene (from the same or different taxon).

Clone ID Target Seq Vector Match Position Match Region[?] SDR Match %[?] Intrinsic Score[?] Adjusted Score[?] Matches Other Human Gene?[?] Orig. Target Gene[?] Addgene[?]
1 TRCN0000051305 GCTGAGCGAGATGTGGTTTAT pLKO.1 2912 3UTR 100% 13.200 9.240 N PARG n/a
2 TRCN0000051304 GCAGTTTAGTAATGCTAACAT pLKO.1 775 3UTR 100% 5.625 3.938 N PARG n/a
3 TRCN0000050799 GCGGTGAAGTTAGATTACATT pLKO.1 1317 3UTR 100% 5.625 3.938 N PARG n/a
4 TRCN0000050801 CCTCAAACAGTAACCCTGGTA pLKO.1 749 3UTR 100% 2.640 1.848 N PARG n/a
5 TRCN0000051307 GCCTAGGAAATTCTCCTCCAT pLKO.1 1095 3UTR 100% 2.640 1.848 N PARG n/a
6 TRCN0000051303 GCTAAGATGAAATCGGAGTAT pLKO.1 2174 3UTR 100% 4.950 2.970 N PARG n/a
7 TRCN0000050802 AGGAACAGATTGCCAGTCTTT pLKO.1 2115 3UTR 100% 4.950 2.475 Y PARG n/a
8 TRCN0000050800 CCAAACATCAAAGAACAGAAA pLKO.1 1524 3UTR 100% 4.950 2.475 Y PARG n/a
9 TRCN0000051306 CGATTGCATGTCACTTACGAA pLKO.1 2384 3UTR 100% 3.000 1.500 Y PARG n/a
10 TRCN0000126561 CCATTCATATACCATGCTGTT pLKO.1 3095 3UTR 100% 4.050 2.430 N Parg n/a
11 TRCN0000312193 CCATTCATATACCATGCTGTT pLKO_005 3095 3UTR 100% 4.050 2.430 N Parg n/a
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shRNA constructs with at least a near match to this transcript

This list includes shRNAs that have at least a >84% (16 of 19 bases) SDR[?] match to the transcript NR_136752.2, regardless of what transcript they were originally designed to target. For example, this list can include shRNAs that were originally designed to target: (i) a different isoform or obsolete version of this transcript (as annotated by NCBI), (ii) a transcript of an orthologous gene (in this collection, generally human-to-mouse or mouse-to-human), or (iii) a transcript of a different gene (from the same or different taxon). NOTE: this download is a superset of the above result set.

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All ORF constructs matching this transcript

No results found.