Transcript: Human XM_006716333.3

PREDICTED: Homo sapiens mitochondrial calcium uptake family member 3 (MICU3), transcript variant X27, mRNA.

Source:
NCBI, updated 2019-09-08
Taxon:
Homo sapiens (human)
Gene:
MICU3 (286097)
Length:
1040
CDS:
41..955

Additional Resources:

NCBI RefSeq record:
XM_006716333.3
NBCI Gene record:
MICU3 (286097)

sgRNA constructs matching this transcript (CRISPRko, NGG PAM)

This list includes CRISPRko constructs with 100% (20mer + NGG) sequence match to the coding regions of this transcript.

No results found.

shRNA constructs matching this transcript with 100% SDR[?] match

This list includes all shRNAs that have a perfect SDR[?] match to Human XM_006716333.3, regardless of what transcript they were originally designed to target. For example, this list can include shRNAs that were originally designed to target: (i) a different isoform or obsolete version of this transcript (as annotated by NCBI), (ii) a transcript of an orthologous gene (in this collection, generally human-to-mouse or mouse-to-human), or (iii) a transcript of a different gene (from the same or different taxon).

Clone ID Target Seq Vector Match Position Match Region[?] SDR Match %[?] Intrinsic Score[?] Adjusted Score[?] Matches Other Human Gene?[?] Orig. Target Gene[?] Addgene[?]
1 TRCN0000056084 CGAAGCTATTTCGAAATCTTA pLKO.1 657 CDS 100% 5.625 7.875 N MICU3 n/a
2 TRCN0000056087 CTGAGGAACTTGTCTCCAGAA pLKO.1 964 3UTR 100% 4.050 2.835 N MICU3 n/a
3 TRCN0000056085 GCAGTTATTCATGACTCCGTA pLKO.1 517 CDS 100% 2.640 1.848 N MICU3 n/a
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shRNA constructs with at least a near match to this transcript

This list includes shRNAs that have at least a >84% (16 of 19 bases) SDR[?] match to the transcript XM_006716333.3, regardless of what transcript they were originally designed to target. For example, this list can include shRNAs that were originally designed to target: (i) a different isoform or obsolete version of this transcript (as annotated by NCBI), (ii) a transcript of an orthologous gene (in this collection, generally human-to-mouse or mouse-to-human), or (iii) a transcript of a different gene (from the same or different taxon). NOTE: this download is a superset of the above result set.

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All ORF constructs matching this transcript

No results found.