Transcript: Human XM_011535127.3

PREDICTED: Homo sapiens ecto-NOX disulfide-thiol exchanger 1 (ENOX1), transcript variant X6, mRNA.

Source:
NCBI, updated 2019-09-08
Taxon:
Homo sapiens (human)
Gene:
ENOX1 (55068)
Length:
3051
CDS:
714..2645

Additional Resources:

NCBI RefSeq record:
XM_011535127.3
NBCI Gene record:
ENOX1 (55068)

sgRNA constructs matching this transcript (CRISPRko, NGG PAM)

This list includes CRISPRko constructs with 100% (20mer + NGG) sequence match to the coding regions of this transcript.

No results found.

shRNA constructs matching this transcript with 100% SDR[?] match

This list includes all shRNAs that have a perfect SDR[?] match to Human XM_011535127.3, regardless of what transcript they were originally designed to target. For example, this list can include shRNAs that were originally designed to target: (i) a different isoform or obsolete version of this transcript (as annotated by NCBI), (ii) a transcript of an orthologous gene (in this collection, generally human-to-mouse or mouse-to-human), or (iii) a transcript of a different gene (from the same or different taxon).

Clone ID Target Seq Vector Match Position Match Region[?] SDR Match %[?] Intrinsic Score[?] Adjusted Score[?] Matches Other Human Gene?[?] Orig. Target Gene[?] Addgene[?]
1 TRCN0000365076 TTGAACAGTGCGGTGATATTA pLKO_005 1198 CDS 100% 15.000 21.000 N ENOX1 n/a
2 TRCN0000370065 CCATACACAAGCGTTACTAAA pLKO_005 2231 CDS 100% 13.200 18.480 N ENOX1 n/a
3 TRCN0000365075 ACCGTGTTTGTCGGAGGATTA pLKO_005 1140 CDS 100% 10.800 15.120 N ENOX1 n/a
4 TRCN0000130610 CCACAGTCATAATGATGGCAA pLKO.1 2889 3UTR 100% 2.640 3.696 N ENOX1 n/a
5 TRCN0000148027 GCTCTGCTAATAGGTATCATA pLKO.1 2415 CDS 100% 5.625 4.500 N ENOX1 n/a
6 TRCN0000146363 CCAGGAGGAGTTAAACAACAA pLKO.1 2174 CDS 100% 4.950 3.960 N ENOX1 n/a
7 TRCN0000248603 TGTGCCTTTGAAGGAATTAAA pLKO_005 2616 CDS 100% 15.000 10.500 N Enox1 n/a
8 TRCN0000248602 AGCGCAAGAACATAGACATTT pLKO_005 1819 CDS 100% 13.200 9.240 N Enox1 n/a
9 TRCN0000365113 AGCGCAAGAACATAGACATTT pLKO_005 1819 CDS 100% 13.200 9.240 N ENOX1 n/a
10 TRCN0000370066 CACAGCCATGAGGATTCAAAT pLKO_005 2304 CDS 100% 13.200 9.240 N ENOX1 n/a
11 TRCN0000377431 TCGAAGCCTGCCTTTAGTTAT pLKO_005 2758 3UTR 100% 13.200 9.240 N ENOX1 n/a
12 TRCN0000130565 CAGCGCAAGAACATAGACATT pLKO.1 1818 CDS 100% 4.950 3.465 N ENOX1 n/a
13 TRCN0000129304 CCAGCGCAAGAACATAGACAT pLKO.1 1817 CDS 100% 4.950 3.465 N ENOX1 n/a
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shRNA constructs with at least a near match to this transcript

This list includes shRNAs that have at least a >84% (16 of 19 bases) SDR[?] match to the transcript XM_011535127.3, regardless of what transcript they were originally designed to target. For example, this list can include shRNAs that were originally designed to target: (i) a different isoform or obsolete version of this transcript (as annotated by NCBI), (ii) a transcript of an orthologous gene (in this collection, generally human-to-mouse or mouse-to-human), or (iii) a transcript of a different gene (from the same or different taxon). NOTE: this download is a superset of the above result set.

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All ORF constructs matching this transcript

No results found.