Transcript: Human XM_011539306.2

PREDICTED: Homo sapiens ADAM metallopeptidase with thrombospondin type 1 motif 14 (ADAMTS14), transcript variant X6, mRNA.

Source:
NCBI, updated 2019-09-08
Taxon:
Homo sapiens (human)
Gene:
ADAMTS14 (140766)
Length:
2768
CDS:
286..2661

Additional Resources:

NCBI RefSeq record:
XM_011539306.2
NBCI Gene record:
ADAMTS14 (140766)

sgRNA constructs matching this transcript (CRISPRko, NGG PAM)

This list includes CRISPRko constructs with 100% (20mer + NGG) sequence match to the coding regions of this transcript.

No results found.

shRNA constructs matching this transcript with 100% SDR[?] match

This list includes all shRNAs that have a perfect SDR[?] match to Human XM_011539306.2, regardless of what transcript they were originally designed to target. For example, this list can include shRNAs that were originally designed to target: (i) a different isoform or obsolete version of this transcript (as annotated by NCBI), (ii) a transcript of an orthologous gene (in this collection, generally human-to-mouse or mouse-to-human), or (iii) a transcript of a different gene (from the same or different taxon).

Clone ID Target Seq Vector Match Position Match Region[?] SDR Match %[?] Intrinsic Score[?] Adjusted Score[?] Matches Other Human Gene?[?] Orig. Target Gene[?] Addgene[?]
1 TRCN0000087249 GCCTACAAGTACGTCATCCAT pLKO.1 2717 3UTR 100% 3.000 4.200 N Adamts14 n/a
2 TRCN0000046705 TCTACTTCAATGTCACTGTTT pLKO.1 602 CDS 100% 4.950 3.465 N ADAMTS14 n/a
3 TRCN0000046707 CCTGGCCTACAAGTACGTCAT pLKO.1 2713 3UTR 100% 4.050 2.835 N ADAMTS14 n/a
4 TRCN0000046703 GACCTGCACAATGAAGCCTTT pLKO.1 949 CDS 100% 4.050 2.835 N ADAMTS14 n/a
5 TRCN0000046706 TGCTTGGCATTCAGGACCTTT pLKO.1 1771 CDS 100% 4.950 2.970 N ADAMTS14 n/a
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shRNA constructs with at least a near match to this transcript

This list includes shRNAs that have at least a >84% (16 of 19 bases) SDR[?] match to the transcript XM_011539306.2, regardless of what transcript they were originally designed to target. For example, this list can include shRNAs that were originally designed to target: (i) a different isoform or obsolete version of this transcript (as annotated by NCBI), (ii) a transcript of an orthologous gene (in this collection, generally human-to-mouse or mouse-to-human), or (iii) a transcript of a different gene (from the same or different taxon). NOTE: this download is a superset of the above result set.

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All ORF constructs matching this transcript

No results found.