Transcript: Human XM_017010009.1

PREDICTED: Homo sapiens ADAM metallopeptidase domain 19 (ADAM19), transcript variant X2, mRNA.

Source:
NCBI, updated 2019-09-08
Taxon:
Homo sapiens (human)
Gene:
ADAM19 (8728)
Length:
5746
CDS:
146..2101

Additional Resources:

NCBI RefSeq record:
XM_017010009.1
NBCI Gene record:
ADAM19 (8728)

sgRNA constructs matching this transcript (CRISPRko, NGG PAM)

This list includes CRISPRko constructs with 100% (20mer + NGG) sequence match to the coding regions of this transcript.

No results found.

shRNA constructs matching this transcript with 100% SDR[?] match

This list includes all shRNAs that have a perfect SDR[?] match to Human XM_017010009.1, regardless of what transcript they were originally designed to target. For example, this list can include shRNAs that were originally designed to target: (i) a different isoform or obsolete version of this transcript (as annotated by NCBI), (ii) a transcript of an orthologous gene (in this collection, generally human-to-mouse or mouse-to-human), or (iii) a transcript of a different gene (from the same or different taxon).

Clone ID Target Seq Vector Match Position Match Region[?] SDR Match %[?] Intrinsic Score[?] Adjusted Score[?] Matches Other Human Gene?[?] Orig. Target Gene[?] Addgene[?]
1 TRCN0000047112 CCTGCTGCAATGCCTCTAATT pLKO.1 666 CDS 100% 13.200 18.480 N ADAM19 n/a
2 TRCN0000047109 CCGCACCAAATTGCATCGTTT pLKO.1 1869 CDS 100% 4.950 6.930 N ADAM19 n/a
3 TRCN0000047110 CCCTACCAACTTCTACCAGAT pLKO.1 826 CDS 100% 4.050 2.835 N ADAM19 n/a
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shRNA constructs with at least a near match to this transcript

This list includes shRNAs that have at least a >84% (16 of 19 bases) SDR[?] match to the transcript XM_017010009.1, regardless of what transcript they were originally designed to target. For example, this list can include shRNAs that were originally designed to target: (i) a different isoform or obsolete version of this transcript (as annotated by NCBI), (ii) a transcript of an orthologous gene (in this collection, generally human-to-mouse or mouse-to-human), or (iii) a transcript of a different gene (from the same or different taxon). NOTE: this download is a superset of the above result set.

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All ORF constructs matching this transcript

No results found.