Transcript: Human XM_024449371.1

PREDICTED: Homo sapiens ecto-NOX disulfide-thiol exchanger 1 (ENOX1), transcript variant X1, mRNA.

Source:
NCBI, updated 2019-09-08
Taxon:
Homo sapiens (human)
Gene:
ENOX1 (55068)
Length:
9289
CDS:
6952..8883

Additional Resources:

NCBI RefSeq record:
XM_024449371.1
NBCI Gene record:
ENOX1 (55068)

sgRNA constructs matching this transcript (CRISPRko, NGG PAM)

This list includes CRISPRko constructs with 100% (20mer + NGG) sequence match to the coding regions of this transcript.

No results found.

shRNA constructs matching this transcript with 100% SDR[?] match

This list includes all shRNAs that have a perfect SDR[?] match to Human XM_024449371.1, regardless of what transcript they were originally designed to target. For example, this list can include shRNAs that were originally designed to target: (i) a different isoform or obsolete version of this transcript (as annotated by NCBI), (ii) a transcript of an orthologous gene (in this collection, generally human-to-mouse or mouse-to-human), or (iii) a transcript of a different gene (from the same or different taxon).

Clone ID Target Seq Vector Match Position Match Region[?] SDR Match %[?] Intrinsic Score[?] Adjusted Score[?] Matches Other Human Gene?[?] Orig. Target Gene[?] Addgene[?]
1 TRCN0000365076 TTGAACAGTGCGGTGATATTA pLKO_005 7436 CDS 100% 15.000 21.000 N ENOX1 n/a
2 TRCN0000370065 CCATACACAAGCGTTACTAAA pLKO_005 8469 CDS 100% 13.200 18.480 N ENOX1 n/a
3 TRCN0000365075 ACCGTGTTTGTCGGAGGATTA pLKO_005 7378 CDS 100% 10.800 15.120 N ENOX1 n/a
4 TRCN0000130610 CCACAGTCATAATGATGGCAA pLKO.1 9127 3UTR 100% 2.640 3.696 N ENOX1 n/a
5 TRCN0000148027 GCTCTGCTAATAGGTATCATA pLKO.1 8653 CDS 100% 5.625 4.500 N ENOX1 n/a
6 TRCN0000146363 CCAGGAGGAGTTAAACAACAA pLKO.1 8412 CDS 100% 4.950 3.960 N ENOX1 n/a
7 TRCN0000248603 TGTGCCTTTGAAGGAATTAAA pLKO_005 8854 CDS 100% 15.000 10.500 N Enox1 n/a
8 TRCN0000248602 AGCGCAAGAACATAGACATTT pLKO_005 8057 CDS 100% 13.200 9.240 N Enox1 n/a
9 TRCN0000365113 AGCGCAAGAACATAGACATTT pLKO_005 8057 CDS 100% 13.200 9.240 N ENOX1 n/a
10 TRCN0000370066 CACAGCCATGAGGATTCAAAT pLKO_005 8542 CDS 100% 13.200 9.240 N ENOX1 n/a
11 TRCN0000377431 TCGAAGCCTGCCTTTAGTTAT pLKO_005 8996 3UTR 100% 13.200 9.240 N ENOX1 n/a
12 TRCN0000130565 CAGCGCAAGAACATAGACATT pLKO.1 8056 CDS 100% 4.950 3.465 N ENOX1 n/a
13 TRCN0000129304 CCAGCGCAAGAACATAGACAT pLKO.1 8055 CDS 100% 4.950 3.465 N ENOX1 n/a
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shRNA constructs with at least a near match to this transcript

This list includes shRNAs that have at least a >84% (16 of 19 bases) SDR[?] match to the transcript XM_024449371.1, regardless of what transcript they were originally designed to target. For example, this list can include shRNAs that were originally designed to target: (i) a different isoform or obsolete version of this transcript (as annotated by NCBI), (ii) a transcript of an orthologous gene (in this collection, generally human-to-mouse or mouse-to-human), or (iii) a transcript of a different gene (from the same or different taxon). NOTE: this download is a superset of the above result set.

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All ORF constructs matching this transcript

No results found.