Nucleotide Global Alignment
Description
- Query:
- TRCN0000465424
- Subject:
- XM_011516920.1
- Aligned Length:
- 2471
- Identities:
- 791
- Gaps:
- 1627
Alignment
Query 1 ATGTCATACGGATCCATCGCCCGTGGAGGTGGCCTGGGGAGCCGTGGCCCTTTCGGGGGACCTTCGAGACAAGG 74
Sbjct 1 -------------------------------------------------------------------------- 0
Query 75 CTGTCAGCCCCTAGAGTGCGCTAGATGTTGGACCGAGTATGGAATCCGCCATTTCCCCTGCCCGTCGCCAGAGA 148
Sbjct 1 -------------------------------------------------------------------------- 0
Query 149 GCAAGCTGCAGAACCGCTGTGTGGGGAAGGACGGGGAAGGTGATCTGGGGCCAGCAGGCACGCCTATTGTCCCA 222
Sbjct 1 -------------------------------------------------------------------------- 0
Query 223 AGGGCCAGGAAGCGAGGGCCTGGGGTTGCCCCTGAAGGCAGCCGGATGCCGGAGCCCACCTCATCACCCACCAT 296
Sbjct 1 -------------------------------------------------------------------------- 0
Query 297 TGGCCCGAGGAAGGACTCGGCTGCTGGGCCCCATGGCCGGATGGCGGGGCCCAGCACTACCCGGGCCAAGAAGA 370
Sbjct 1 -------------------------------------------------------------------------- 0
Query 371 GGAAGCCCAACTTCTGCCCGCAGGAGACCGAGGTGCTGGTGTCCAAGGTGAGCAAGCACCACCAGCTGCTGTTT 444
Sbjct 1 -------------------------------------------------------------------------- 0
Query 445 GGCACGGGGCTGCTGAAGGCCGAGCCCACTCGCAGGTACCGCGTGTGGAGCCGCATCCTGCAGGCCGTGAATGC 518
Sbjct 1 -------------------------------------------------------------------------- 0
Query 519 GCTGGGCTACTGTCGCCGCGACGTTGTGGACCTGAAGCACAAGTGGCGGGACCTACGAGCCGTCGTGCGGCGCA 592
Sbjct 1 -------------------------------------------------------------------------- 0
Query 593 AGCTGGGCGACCTCCGGAAGGCGGCCCATGGCCCCAGCCCTGGTTCCGGCAAGCCCCAGGCCCT--GGCTCTCA 664
|.|.|.| ||.|| ||
Sbjct 1 ---------------------------------------------------------ATGTCATACGGATC-CA 16
Query 665 -CGCCCGTGGAGCAGGTGGTGGCC----AAGACCTTCTCTTGCCAGGCCCT-------GCCCTCCGAG----GG 722
|||||||||| ||||||| .||.|.| |||||| |.|||.|||| ||
Sbjct 17 TCGCCCGTGGA------GGTGGCCTGGGGAGCCGT----------GGCCCTTTCGGGGGACCTTCGAGACAAGG 74
Query 723 CT-TCAGTCTGGAGCCGCCCAGAGCCACCCAGGTCGATCCGTGCAACCTCCAGGAGCTGTTCCAGGAGATGTCG 795
|| ||| ||||..||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 CTGTCA----------GCCCCTAGCCACCCAGGTCGATCCGTGCAACCTCCAGGAGCTGTTCCAGGAGATGTCG 138
Query 796 GCCAACGTCTTCCGAATCAACTCCAGTGTGACCTCCTTGGAGCGGAGCCTTCAGTCCTTAGGGACACCGAGTGA 869
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 139 GCCAACGTCTTCCGAATCAACTCCAGTGTGACCTCCTTGGAGCGGAGCCTTCAGTCCTTAGGGACACCGAGTGA 212
Query 870 CACGCAGGAGCTTCGGGACAGCCTGCACACGGCACAGCAGGAGACCAACAAGACCATTGCAGCCAGCGCCAGCT 943
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 213 CACGCAGGAGCTTCGGGACAGCCTGCACACGGCACAGCAGGAGACCAACAAGACCATTGCAGCCAGCGCCAGCT 286
Query 944 CCGTGAAGCAGATGGCCGAGCTGCTGCGCAGCTCCTGCCCGCAGGAGCGTCTGCAGCAGGAGCGTCCTCAGCTG 1017
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 287 CCGTGAAGCAGATGGCCGAGCTGCTGCGCAGCTCCTGCCCGCAGGAGCGTCTGCAGCAGGAGCGTCCTCAGCTG 360
Query 1018 GACCGGCTGAAAACCCAGCTCTCAGATGCCATTCAGTGCTATGGAGTGGTGCAGAAGAAAATTGCAGAAAAGTC 1091
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 361 GACCGGCTGAAAACCCAGCTCTCAGATGCCATTCAGTGCTATGGAGTGGTGCAGAAGAAAATTGCAGAAAAGTC 434
Query 1092 CAGAGCGCTGCTTCCCATGGCGCAGAGGGGCAGTAAA---CAGAGTCCCCAGGCCCCGTTTGCCGAGCTGGCTG 1162
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 435 CAGAGCGCTGCTTCCCATGGCGCAGAGGGGCAGTAAACAGCAGAGTCCCCAGGCCCCGTTTGCCGAGCTGGCTG 508
Query 1163 ATGATGAGAAGGTCTTTAACGGGAGTGACAACATGTGGCAGGGCCAGGAGCAGGCGCTGCTCCCGGACATCACT 1236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 509 ATGATGAGAAGGTCTTTAACGGGAGTGACAACATGTGGCAGGGCCAGGAGCAGGCGCTGCTCCCGGACATCACT 582
Query 1237 GAAGAGGACCTGGAGGCCATCCGGCTGCGGGAGGAGGCCATCCTGCAGATGGAGAGCAACTTGCTGGATGTGAA 1310
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 583 GAAGAGGACCTGGAGGCCATCCGGCTGCGGGAGGAGGCCATCCTGCAGATGGAGAGCAACTTGCTGGATGTGAA 656
Query 1311 TCAGATCATCAAGGACTTGGCCTCCATGGTGTCAGAGCAAGGAGAAGCTGTTG------ATAGTATTGAAGCCA 1378
||||||||||||||||||||||||||||||||||||||||||||||||||||| ..||.|...||||||
Sbjct 657 TCAGATCATCAAGGACTTGGCCTCCATGGTGTCAGAGCAAGGAGAAGCTGTTGGGTCCAGCAGCAGCAAAGCCA 730
Query 1379 ---GCCTTGAG-GCTGCGTCCTC--GCATGCGGAGGCAGCCCGCCAGCT-----CCTGGCTGGAGC----CAGC 1437
|||...|| |||||..||.| ||..||.|.||||||||..|.||| ||.|||.|| || ||.|
Sbjct 731 TCTGCCAGCAGAGCTGCAGCCCCGAGCCGGCCGCGGCAGCCCTGCTGCTGGGTGCCGGGCCGG-GCTCCACACC 803
Query 1438 C---------GGCACCAACTCC-------AGAGACACAAGATCAA----------------------GTGCTGC 1473
| |||.||.||||| |||.||.||||..||| ||||||.
Sbjct 804 CCTGCGGCCGGGCCCCCACTCCCGCACCAAGACACGCAAGCCCAACTTCAGCCCCCAGGAGACGGAGGTGCTGG 877
Query 1474 TTC----------------CTATCAGCTGGAG-TCACTGCCCTGCTTGTCATCATCATCATCATCGCCACCTCT 1530
|.| |||.|.||||..| ||...||.||||..|.|| ||| ||
Sbjct 878 TGCAGAGGGTGCGGCGCCACTACCCGCTGCTGTTCGGGGCGCTGCGGGGCA----------------CAC--CT 933
Query 1531 GTCCGAAAG----------------------------------------------------------------- 1539
|.|||||||
Sbjct 934 GCCCGAAAGCACCGCGTGTGGAGCCGCATCCTGCAGGCAGTGAACGCGCTGGGCTACTGCCGCCGCGACCTGGG 1007
Query 1540 -------------------------------------------------------------------------- 1539
Sbjct 1008 GGACCTCAAGCACAAGTGGCGGGACCTGCGAGGTGCTGTGCGCAAGAAGCTGGCGGAGGGCGGCCCCGCCCCCG 1081
Query 1540 -------------------------------------------------------------------------- 1539
Sbjct 1082 GCCTCCTCCTCACACCTGTGGAGCGCATGGTGGCAGAGACCTTTTCTGCCCACGGTCCCCAAGGCGAGGGCCAG 1155
Query 1540 -------------------------------------------------------------------------- 1539
Sbjct 1156 ACCACGGAGCCCCTGCCAACTGATGAGGAGGACGAGACCCCCAGCTGCTTGTGGCTGCCCCTGAGGTCCCTGGA 1229
Query 1540 -------------------------------------------------------------------------- 1539
Sbjct 1230 AGGGCCCAGCCTGCCTGAACCTGACCCCCTGGACTTACGAGGAGTCTTCCACGCACCCACCTCCTCACCCTCCC 1303
Query 1540 -------------------------------------------------------------------------- 1539
Sbjct 1304 CACCTGCTTCCCCAGCCTCCACCCCACCAGCAACCACACTCATGGGGGCCTTCCAGCCTTCCCCGCCCTCTTCG 1377
Query 1540 -------------------------------------------------------------------------- 1539
Sbjct 1378 GCGCCAGCACCTCCCTTGCCCTCCAGGAGGACCCCAGCGGCAGCATCTGAAACGTCCGCATTTGAGCAGCAGCT 1451
Query 1540 -------------------------------------------------------------------------- 1539
Sbjct 1452 GCTGGACTCCCACCGGCAGCAGGGCGCCCTGCTGTCCTCCTGGGCCCAGCAGCAGAGCACACTCATGGCCCAGC 1525
Query 1540 -------------------------------------------------------------------------- 1539
Sbjct 1526 AAAACCTGCTGCTGCAGCGGCTGGCCGAGCAGAGCCAGCGTCTGGCCGATGGCGTGGAGGCCCTCAACCGGACC 1599
Query 1540 -------------------------------------------------------------------------- 1539
Sbjct 1600 CTCGAGAGGCTGGTGGAAGCACGCCCTACCCGGGAAGCCTCACCCTCACTCCAGGACGGTAGTCCTGCCAGTGG 1673
Query 1540 -------------------------------------------------------------------------- 1539
Sbjct 1674 AGTGGCCCAGGGGCCTGCTGGAGGCTCCCAGGACAGCCCCAAGGGCACCCACTCGGGGCTCGAGGTCTTCTCAG 1747
Query 1540 ----------------------------- 1539
Sbjct 1748 GGATGATCTTGAAGGTGGAGGAGGAGATA 1776
