Nucleotide Global Alignment
Description
- Query:
- TRCN0000465557
- Subject:
- XR_247045.3
- Aligned Length:
- 4339
- Identities:
- 731
- Gaps:
- 3608
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 AGCCAGGACTGGAGTCGGTACTTAAGAGTGATGGGGTTCCCTAGATACTTTAGGCCGTCGCATCGATTATAGAG 74
Query 1 -------------------------------------------------------------------------- 0
Sbjct 75 ATTGAGGTGGAACCCGGGGCCTGGGAACTGGACGCACGCGGAGGGCGAAGATGGAAGCCTGGCGCTGTGTGAGG 148
Query 1 -------------------------------------------------------------------------- 0
Sbjct 149 AAGGGCTACGGCCACTGTGTGGTGGGAAGAGGCCGATACCCCATGTTTCCCCATCACTCGAGGAGTCTGGGCAG 222
Query 1 -------------------------------------------------------------------------- 0
Sbjct 223 AGACTGGACTACACCGTGGGAGAATCTGCAAAGGTGTTGCTGGAACAGACATATTTCTAGTTGTATGAGGTGGC 296
Query 1 -------------------------------------------------------------------------- 0
Sbjct 297 CTGGACATTACTCTCGAGCTCCTTACCCATACTTCAGTAGTAGGCATTTTTCACTAAATTGGAGACCACCCTGT 370
Query 1 -------------------------------------------------------------------------- 0
Sbjct 371 TTGTTTGAGTCTAGAACTCAGTTCCAGTACTGTAACTGGAGACCTGACAACCTGAGCCAGACATCTTTGATTCA 444
Query 1 -------------------------------------------------------------------------- 0
Sbjct 445 TCTCTCTAGTTACGTCATGAACGCTGAGGGAGATGAGCCTTCATCAAAACGAAGAAAACACCAAGGTGTGATAA 518
Query 1 -------------------------------------------------------------------------- 0
Sbjct 519 AGCGGAATTGGGAATATATATGTAGCCATGATAAAGAAAAAACGAAGATCCTAGGAGACAAAAATGTTGATCCC 592
Query 1 ---------------------------------------ATGTCCTATAATATACTTTCACAAGATTTACTGGA 35
|||||||||||||||||||||||||||||||||||
Sbjct 593 AAATGTGAAGACAGTGAGAACAAGTTTGACTTTTCAGTGATGTCCTATAATATACTTTCACAAGATTTACTGGA 666
Query 36 AGATAACTCTCACCTTTATAGACATTGCCGGCGGCCAGTATTACACTGGAGTTTTAGGTTTCCCAATATTCTGA 109
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 AGATAACTCTCACCTTTATAGACATTGCCGGCGGCCAGTATTACACTGGAGTTTTAGGTTTCCCAATATTCTGA 740
Query 110 AAGAAATTAAACATTTTGATGCAGACGTACTTTGTTTGCAAGAAGTTCAAGAAGATCATTATGGAGCAGAGATC 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 AAGAAATTAAACATTTTGATGCAGACGTACTTTGTTTGCAAGAAGTTCAAGAAGATCATTATGGAGCAGAGATC 814
Query 184 AGGCCAAGTTTGGAATCACTGGGTTATCACTGTGAATATAAGATGCGGACAGGAAGGAAACCTGATGGCTGTGC 257
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 AGGCCAAGTTTGGAATCACTGGGTTATCACTGTGAATATAAGATGCGGACAGGAAGGAAACCTGATGGCTGTGC 888
Query 258 TATTTGCTTCAAACATTCCAAATTTTCACTCTTGTCAGTGAACCCAGTGGAATTCTTCCGCCCTGATATTTCTC 331
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 TATTTGCTTCAAACATTCCAAATTTTCACTCTTGTCAGTGAACCCAGTGGAATTCTTCCGCCCTGATATTTCTC 962
Query 332 TGTTGGACAGAGACAATGTTGGATTAGTTTTACTCTTACAGCCCAAAATTCCATATGCTGCCTGCCCTGCAATC 405
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 963 TGTTGGACAGAGACAATGTTGGATTAGTTTTACTCTTACAGCCCAAAATTCCATATGCTGCCTGCCCTGCAATC 1036
Query 406 TGCGTAGCAAATACGCATCTGTTGTATAATCCAAGGCGAGGTGATATTAAGCTGACGCAATTGGCAATGCTACT 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1037 TGCGTAGCAAATACGCATCTGTTGTATAATCCAAGGCGAGGTGATATTAAGCTGACGCAATTGGCAATGCTACT 1110
Query 480 GGCAGAGATTTCCAGTGTTGCCCACCAGAAAGATGGCAGCTTCTGCCCTATTGTTATGTGTGGTGACTTTAATT 553
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1111 GGCAGAGATTTCCAGTGTTGCCCACCAGAAAGATGGCAGCTTCTGCCCTATTGTTATGTGTGGTGACTTTAATT 1184
Query 554 CTGTTCCTGGTTCTCCACTATATAGTTTCATAAAGGAAGGAAAATTGAATTATGAAGGACTTCCCATAGGAAAG 627
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1185 CTGTTCCTGGTTCTCCACTATATAGTTTCATAAAGGAAGGAAAATTGAATTATGAAGGACTTCCCATAGGAA-- 1256
Query 628 GTATCTGGCCAGGAACAGTCTTCACGGGGACAAAGAATTTTATCTATTCCAATTTGGCCCCCAAACCTAGGTAT 701
Sbjct 1257 -------------------------------------------------------------------------- 1256
Query 702 CTCACAGAACTGTGTGTATGAGGTACAGCAGGTACCAAAAGTAGAAAAGACAGACAGTGATCTGACACAAACAC 775
|||||||||||||||||||||||
Sbjct 1257 ---------------------------------------------------AGACAGTGATCTGACACAAACAC 1279
Query 776 AGCTGAAGCAAACAGAGGTCCTAGTGACAGCTGAAAAATTGTCTTCAAATTTACAGCACCATTTCAGTTTGTCA 849
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1280 AGCTGAAGCAAACAGAGGTCCTAGTGACAGCTGAAAAATTGTCTTCAAATTTACAGCACCATTTCAGTTTGTCA 1353
Query 850 TCTGTTTAT----------------------------------------------------------------- 858
|||||||||
Sbjct 1354 TCTGTTTATTCACATTACTTTCCTGACACTGGAATTCCAGAAGTGACCACCTGTCATTCCCGAAGTGCCATAAC 1427
Query 859 -------------------------------------------------------------------------- 858
Sbjct 1428 TGTGGATTATATTTTCTACTCTGCAGAAAAGGAAGATGTTGCTGGGCACCCAGGAGCTGAAGTTGCTTTGGTTG 1501
Query 859 -------------------------------------------------------------------------- 858
Sbjct 1502 GTGGCTTGAAACTTCTAGCTAGACTGTCACTTCTTACAGAACAAGACTTATGGACTGTTAATGGACTTCCAAAC 1575
Query 859 -------------------------------------------------------------------------- 858
Sbjct 1576 GAAAATAACTCTTCAGATCATCTGCCTTTATTGGCAAAGTTCAGACTTGAGCTCTGACTCTCTTTGATCACATA 1649
Query 859 -------------------------------------------------------------------------- 858
Sbjct 1650 CTAATTTTCTTTCCAATTTGTATTGTTTTTCAAAGAATGTAAAGTTCTTAAGTGTATGCATGTTGTTTATTTTT 1723
Query 859 -------------------------------------------------------------------------- 858
Sbjct 1724 GCACTGTGGAGATTCTGAAGCGGTTATGTTAGATGCTTTGAAACTCCATATCAGAAGAAATAACTTTATAACAA 1797
Query 859 -------------------------------------------------------------------------- 858
Sbjct 1798 TTTTTTTTAATAATGAAAAATATTTTCGTGACAAGTGAGCTCTAAATTCTCTTTATTGTAAAAGAGATGTAAAG 1871
Query 859 -------------------------------------------------------------------------- 858
Sbjct 1872 GTTTTATATTCTAAATCCTAGTAAAATTGACAGTGATTTTTAAATATAATGCATCTTCCTTTGTCTGCTTAGTA 1945
Query 859 -------------------------------------------------------------------------- 858
Sbjct 1946 AAAAATTTCATTTCATAATTTTGGCAAGCTCTGTAGTGGATCCAAAGTATCTTTGAGTTCTTGCAAACTACAAG 2019
Query 859 -------------------------------------------------------------------------- 858
Sbjct 2020 TTGTTTCCTTTCCAGAAGGCTTGATTTCATTAGGAGACCCCTCTATTGAGTTCTAAATAGTTTATCTTAGAAAG 2093
Query 859 -------------------------------------------------------------------------- 858
Sbjct 2094 CCTTGGGTCATTCACAGGTATCCAACCAGCCATTGTTTAGTTTGTTTTTGAAGGGGTTTGATAATGCTTTTTAA 2167
Query 859 -------------------------------------------------------------------------- 858
Sbjct 2168 GTTGTACAGAATGCTTAATCCATCTTATTACTGTCCTGAGCCATGTAATATGCCTGCATCGTGTTGGGGAAATG 2241
Query 859 -------------------------------------------------------------------------- 858
Sbjct 2242 TTTGGGAAATATAAGCCAGCATAACGTGTAAAGCTCACTCTTTCACCCTGGAACAGACAAGAGGTGGGCTTAAT 2315
Query 859 -------------------------------------------------------------------------- 858
Sbjct 2316 AGAGGCAGAGACTGGGGATATACCTTTGTTTCCCTAGCATTTTTATTTATTTATTTTTATTTTATTTTATTTTT 2389
Query 859 -------------------------------------------------------------------------- 858
Sbjct 2390 TGAGATGGAGTTTCACTCTTGTTGCCCAGGCTGGGGGTGCAATGGCGCAATCTTTGCTCACTGCAACCCCTGCC 2463
Query 859 -------------------------------------------------------------------------- 858
Sbjct 2464 TCCCGGGCTCAAGCGATTCTCCTGCCTCAGCCTCTCGAGTAGCTGGGATTACAGGCATGCGTCACCACTCCCAG 2537
Query 859 -------------------------------------------------------------------------- 858
Sbjct 2538 CTAATTTTGTATTTTCAGTAGAGACAGGGTTTCCCCATGTTGGTTAGGCTGGTCTCGAACTCCCAACCTCAGGT 2611
Query 859 -------------------------------------------------------------------------- 858
Sbjct 2612 GATCCGCCCACCTCAGCTCTCAAAGTGCTGGGATTACAGGCGGGAGCCACTGCACATGGCAGCATTTTTTAAAA 2685
Query 859 -------------------------------------------------------------------------- 858
Sbjct 2686 ATTCAGTTTTAAGATCTCTGGTTTAGGGGAGAGATTTTATTTTACTGAACCAGTTCTATAGAAATTTATTTTAT 2759
Query 859 -------------------------------------------------------------------------- 858
Sbjct 2760 TAGGAAATTTGTCTTTGGAACAAAGTGGCAGCTATAAAATTATTTTTGTTAAGCCTCAGAAATATGAGGAAGCC 2833
Query 859 -------------------------------------------------------------------------- 858
Sbjct 2834 TGTAAAACTCTAGTGGGGAGATATTAACTTGGAGACCTAATGCTCTGTAAATAGTCATTTAAACTGTTGGTTTT 2907
Query 859 -------------------------------------------------------------------------- 858
Sbjct 2908 AGTGGTTTTGTTTCTAAAATGTTTTCTTTTACCGTGATGCACCAGTATGAGATGGTGCTGACACTTTCTATGAA 2981
Query 859 -------------------------------------------------------------------------- 858
Sbjct 2982 GTGGTTATGAGCAGGTTTAATAAATCCTCTATACAAGTGTTTGAATCAATTTTAAAACATAAAAAGTGGAAATT 3055
Query 859 -------------------------------------------------------------------------- 858
Sbjct 3056 TCCTTTTTTGTAGACAGTAGGAACAAGGAATTATATGCATTTTTACTAAGTAGTAATTTTACACTGAATTGTAA 3129
Query 859 -------------------------------------------------------------------------- 858
Sbjct 3130 ATGTTTTTACAGTGAGTTTTATTAATAGAATGCTTCACCTTAAATTGGAAAACAATAATAGTCTTGGACTAAGT 3203
Query 859 -------------------------------------------------------------------------- 858
Sbjct 3204 CTTTGTACTAAAGCATTTGCTATAATTATTTTTAAAAAAACAAACAGATGAAAACCTCAGAGAAGGCATGTGGA 3277
Query 859 -------------------------------------------------------------------------- 858
Sbjct 3278 TTATAAGATTTGTCTAGTAAAAATTGTAATTGAATATGTTTAAATATTTAATTTCTCATTTTGGGGGGTTTTTA 3351
Query 859 -------------------------------------------------------------------------- 858
Sbjct 3352 TTTTTTTATTTTTTAGATGGTGTCTCACGCTATCGCCCAGGCTGGAGTGCAGTGGCGCGAACTCGGCTCACTGC 3425
Query 859 -------------------------------------------------------------------------- 858
Sbjct 3426 AACCTCCGCCTCCTGGGTTCAAGCAATTCTCCTTCCTCAGCCTCCCAAGTAGCTGGGATTACAGGCATGCACCA 3499
Query 859 -------------------------------------------------------------------------- 858
Sbjct 3500 CCATGCCCAGCTAATTTTTGTATTTTTAGTAGAGATGGAATTTTGCCATGTTGGCCAGGCTGGTCTTGAACTCC 3573
Query 859 -------------------------------------------------------------------------- 858
Sbjct 3574 TGACCTCAGGGGTGATCCACCCGCCTCGGGCTCCCAAAGTGCTGTGATTACAGGCATGAGCCACCATGCCTGGC 3647
Query 859 -------------------------------------------------------------------------- 858
Sbjct 3648 CTTTGGGGGGATTTTAATTACAGTATTAATTATAGTTCTAGGATTTCCCACATTTTATAGTAGTAGTTTGCAGG 3721
Query 859 -------------------------------------------------------------------------- 858
Sbjct 3722 ATATTATGTGCCCTAATTAGCAGATATAGACATTATCAAATTATAATGATAGTATAATTATCCCTTTTTAATAT 3795
Query 859 -------------------------------------------------------------------------- 858
Sbjct 3796 TGGGGAAAGAAAAATGAAAATTCATTAGTTAATTACTGCTTTGTGTTGTGTGAATTTATTAACAAATAACATTA 3869
Query 859 -------------------------------------------------------------------------- 858
Sbjct 3870 TTACATATAGGTCATTGTTAACAAACAAACATCCCTGAAAACCTCTGTGAAAATTTAATTTTTTATATCCTGAT 3943
Query 859 -------------------------------------------------------------------------- 858
Sbjct 3944 TAATATATTGTGACTTTAGGCCCATTTTTCATGTGCTTCACTTTGATAGAGTTAATCCATAAAATTGCTCTTTA 4017
Query 859 -------------------------------------------------------------------------- 858
Sbjct 4018 CTTTAGCTTATCAAATGAAGTATTATTTTGTGGACTGGAGGCCAAAAAGTCAATGTGAGCTTCTCACAGGTTTT 4091
Query 859 -------------------------------------------------------------------------- 858
Sbjct 4092 TAAAGCTCCACTAAAAATAATTATCCACTTGTCTTTACTTTTGTTGACCAGAATAGTTGGTAACTCTGCCAGAG 4165
Query 859 ----------------------------------------------- 858
Sbjct 4166 CCTGTACTTACCTGCCAAAAACAATTAAATCTGGTTAATGCCTGAAA 4212
