Nucleotide Global Alignment
Description
- Query:
- TRCN0000465921
- Subject:
- NR_027514.3
- Aligned Length:
- 3515
- Identities:
- 983
- Gaps:
- 2532
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 CTTGACGCTGTGGCCCGGAAGTGGAGCGGCTGTCGCAGTGCGGCTCCGGCAGTGGCAGCGGAGGCCTGTGTTTG 74
Query 1 ----------------------ATGGCGAGCGCAACTGCACCTGCAGCCGCAGTCCCCACCCTGGCTTCGCCTT 52
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 CGGCCTTCGGCAAGCGACTGAGATGGCGAGCGCAACTGCACCTGCAGCCGCAGTCCCCACCCTGGCTTCGCCTT 148
Query 53 TGGAGCAGCTCCGGCACTTGGCGGAGGAGCTGCGGTTGCTCCTGCCTCGAGTGCGGGTCGGCGAAGCCCAGGAG 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 TGGAGCAGCTCCGGCACTTGGCGGAGGAGCTGCGGTTGCTCCTGCCTCGAGTGCGGGTCGGCGAAGCCCAGGAG 222
Query 127 ACCACCGAGGAGTTTAATCGAGAGATGTTCTGGAGAAGACTCAATGAGGCAGCTGTGACTGTGTCAAGGGAAGC 200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 ACCACCGAGGAGTTTAATCGAGAGATGTTCTGGAGAAGACTCAATGAGGCAGCTGTGACTGTGTCAAGGGAAGC 296
Query 201 CACGACTCTGACCATAGTCTTCTCTCAGCTTCCACTGCCGTCTCCACAGGAAACCCAGAAGTTCTGTGAACAAG 274
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 CACGACTCTGACCATAGTCTTCTCTCAGCTTCCACTGCCGTCTCCACAGGAAACCCAGAAGTTCTGTGAACAAG 370
Query 275 TCCATGCTGCCATCAAGGCATTTATTGCAGTGTACTATTTGCTTCCAAAGGATCAGGGGATCACCCTGAGAAAG 348
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 TCCATGCTGCCATCAAGGCATTTATTGCAGTGTACTATTTGCTTCCAAAGGATCAG------------------ 426
Query 349 CTGGTACGGGGCGCCACCCTGGACATCGTGGATGGCATGGCTCAGCTCATGGAAGTACTTTCCGTCACTCCAAC 422
Sbjct 427 -------------------------------------------------------------------------- 426
Query 423 TCAGAGCCCTGAGAACAATGACCTTATTTCCTACAACAGTGTCTGGGTTGCGTGCCAGCAGATGCCTCAGATAC 496
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 427 -----GCCCTGAGAACAATGACCTTATTTCCTACAACAGTGTCTGGGTTGCGTGCCAGCAGATGCCTCAGATAC 495
Query 497 CAAGAGATAACAAAGCTGCAGCTCTTTTGATGCTGACCAAGAATGTGGATTTTGTGAAGGATGCACATGAAGAA 570
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 496 CAAGAGATAACAAAGCTGCAGCTCTTTTGATGCTGACCAAGAATGTGGATTTTGTGAAGGATGCACATGAAGAA 569
Query 571 ATGGAGCAGGCTGTGGAAGAATGTGACCCTTACTCTGGCCTCTTGAATGATACTGAGGAGAACAACTCTGACAA 644
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 570 ATGGAGCAGGCTGTGGAAGAATGTGACCCTTACTCTGGCCTCTTGAATGATACTGAGGAGAACAACTCTGACAA 643
Query 645 CCACAATCATGAGGATGATGTGTTGGGGTTTCCCAGCAATCAGGACTTGTATTGGTCAGAGGACGATCAAGAGC 718
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 644 CCACAATCATGAGGATGATGTGTTGGGGTTTCCCAGCAATCAGGACTTGTATTGGTCAGAGGACGATCAAGAGC 717
Query 719 TCATAATCCCATGCCTTGCGCTGGTGAGAGCATCCAAAGCCTGCCTGAAGAAAATTCGGATGTTAGTGGCAGAG 792
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 718 TCATAATCCCATGCCTTGCGCTGGTGAGAGCATCCAAAGCCTGCCTGAAGAAAATTCGGATGTTAGTGGCAGAG 791
Query 793 AATGGGAAGAAGGATCAGGTGGCACAGCTGGATGACATTGTGGATATTTCTGATGAAATCAGCCCTAGTGTGGA 866
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 792 AATGGGAAGAAGGATCAGGTGGCACAGCTGGATGACATTGTGGATATTTCTGATGAAATCAGCCCTAGTGTGGA 865
Query 867 TGATTTGGCTCTGAGCATATATCCACCTATGTGTCACCTGACCGTGCGAATCAATTCTGCGAAACTTGTATCTG 940
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 866 TGATTTGGCTCTGAGCATATATCCACCTATGTGTCACCTGACCGTGCGAATCAATTCTGCGAAACTTGTATCTG 939
Query 941 TTTTAAAGAAGGCACTTGAAATTACAAAAGCAAGTCATGTGACCCCTCAGCCAGAAGATAGTTGGATCCCTTTA 1014
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 940 TTTTAAAGAAGGCACTTGAAATTACAAAAGCAAGTCATGTGACCCCTCAGCCAGAAGATAGTTGGATCCCTTTA 1013
Query 1015 CTTATTAATGCCATTGATCATTGCATGAATAGAATCAAGGAGCTCACTCAGAGTGAACTTGAATTA-------- 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1014 CTTATTAATGCCATTGATCATTGCATGAATAGAATCAAGGAGCTCACTCAGAGTGAACTTGAATTATGACTTTT 1087
Query 1081 -------------------------------------------------------------------------- 1080
Sbjct 1088 CAGGCTCATTTGTACTCTCTTCCCCTCTCATCGTCATGGTCAGGCTCTGATACCTGCTTTTAAAATGGAGCTAG 1161
Query 1081 -------------------------------------------------------------------------- 1080
Sbjct 1162 AATGCTTGCTGGATTGAAAGGGAGTGCCTATCTATATTTAGCAAGAGACACTATTACCAAAGATTGTTGGTTAG 1235
Query 1081 -------------------------------------------------------------------------- 1080
Sbjct 1236 GCCAGATTGACACCTATTTATAAACCATATGCGTATATTTTTCTGTGCTATATATGAAAAATAATTGCATGATT 1309
Query 1081 -------------------------------------------------------------------------- 1080
Sbjct 1310 TCTCATTCCTGAGTCATTTCTCAGAGATTCCTAGGAAAGCTGCCTTATTCTCTTTTTGCAGTAAAGTATGTTGT 1383
Query 1081 -------------------------------------------------------------------------- 1080
Sbjct 1384 TTTCATTGTAAAGATGTTGATGGTCTCAATAAAATGCTAACTTGCCAGTGATTAAATGAGTGCCCTTCCAAAGT 1457
Query 1081 -------------------------------------------------------------------------- 1080
Sbjct 1458 TTCTTTTTACCAGAAATACAGTGGATTGAGACTAGAACATTGCTTTCATTTGGGTTTGTAGGTTTAAAAATCTG 1531
Query 1081 -------------------------------------------------------------------------- 1080
Sbjct 1532 ATTCTAATCAGAAGTATATTTAGAACAAAACACTTTATTTATAAAAGATGACTCCAAAATTCATCTTAGTATTT 1605
Query 1081 -------------------------------------------------------------------------- 1080
Sbjct 1606 CACCATGTTATATATTATTATCAGCAAGTCCTTCTGAATATTATCACAGATTACTCCATGTCTCTAAAATATAT 1679
Query 1081 -------------------------------------------------------------------------- 1080
Sbjct 1680 TGGCATTGAGCTCATTTGTTAGGTTTGCCCACCTTATTGAACAGATTTATTTTCCTTATACATACTTGTGTTGT 1753
Query 1081 -------------------------------------------------------------------------- 1080
Sbjct 1754 CCTTGGTTACGTGTGTCCCCAAATGTAAATACCAAATTTTTATAAATCAAAAATTTTTTAGTGTGTAAGAGATT 1827
Query 1081 -------------------------------------------------------------------------- 1080
Sbjct 1828 TTATGTAATTTTAAGGGCCTTTTCAGTTCATCCTTTTGCAAAACCATCACCACTTAATTATACTTTTGCATCAG 1901
Query 1081 -------------------------------------------------------------------------- 1080
Sbjct 1902 TCTAGAAGACTGCATATTGGAAAGCAGTGTAAATCTATAATGATGTATATTCTGGTGAGCTGAATAGGGCATTA 1975
Query 1081 -------------------------------------------------------------------------- 1080
Sbjct 1976 TGCATGTCCTACAGGTCTCCGCCACCTCTCATGCCCATCATCTTCCTTTTGTAGGTGTAATTCATAACATATGC 2049
Query 1081 -------------------------------------------------------------------------- 1080
Sbjct 2050 CTTTCTGCTGTCTTTAGGTATAATCAGCAACAGCAGTCATTCTTTGAGTGACTAATGTATACTTGGGGTTGGGG 2123
Query 1081 -------------------------------------------------------------------------- 1080
Sbjct 2124 TTGAAATTCCTTAAGCCAAATGAGTTTTAGCTTACTGTTTTGAAGTGCCATTTTGTATTGTTAACAAGTGTCAT 2197
Query 1081 -------------------------------------------------------------------------- 1080
Sbjct 2198 GAAGGGAAGGAACTAAAATCAAACTGACAGAGTGTCAAGGCAACAAAATAACATAAACAAAATAATAACATTGT 2271
Query 1081 -------------------------------------------------------------------------- 1080
Sbjct 2272 ACAACAGTCTAGTTCTTTTATCCTTTCATATAGAGCCTATTTTTTATATACTTTTATATTTCTCTACTGGACCA 2345
Query 1081 -------------------------------------------------------------------------- 1080
Sbjct 2346 AATTCATGTTATTAACATCAGACTTTAATTGTGGGATACTTAATGAATATAGAACTCTAATATAAAGACTTACC 2419
Query 1081 -------------------------------------------------------------------------- 1080
Sbjct 2420 TCTAGCTGAATTATTCTCTCAGGTCCTGTATTGTATAACTTCGTTCAGTCATGTTTGGATCTTTAAGGATAATG 2493
Query 1081 -------------------------------------------------------------------------- 1080
Sbjct 2494 ATCAGGGAAAGCACTGATCAATGTAATTTTTTTTTTTTTTTTTTTTTTTTTGAGATGGAGTCTTGCTCTGTCCC 2567
Query 1081 -------------------------------------------------------------------------- 1080
Sbjct 2568 CCAAGCTGGAGTGCAGTGGCACACTCTCGGCTCACTGCAACCTCCGCCTCCCAGGTTCTCAAGCAATTCTCTGG 2641
Query 1081 -------------------------------------------------------------------------- 1080
Sbjct 2642 CTTCAGCCTCTCAAGTAGCTGGGACTACAGATGCACACCACCATGTCCAGCTAATTTTTGTATTTTTAGTAGAG 2715
Query 1081 -------------------------------------------------------------------------- 1080
Sbjct 2716 ATGGGGTTTCACCATGTTGGCCAGGCTGGTCTCAAACTCCTGACCTCAGGTGATCTGCCCACGTCAGCCTCCCA 2789
Query 1081 -------------------------------------------------------------------------- 1080
Sbjct 2790 AAGTGCTGGGATTACAGATGTGAGCCACCGAGCCCAGCTTGATCAATGTAATTTTAAGATTACCTAAAAATTCC 2863
Query 1081 -------------------------------------------------------------------------- 1080
Sbjct 2864 ATTTTGGGATAATATCCCACTTCATCAGAAATATTAGAATGATTTAAGTGTTAGGTCCTTTCCCTTATCTGTAA 2937
Query 1081 -------------------------------------------------------------------------- 1080
Sbjct 2938 GTTAATGAATGTATTAATGAGCAGTAAAATGGTTGCAAAAAACCTGAACCTGAACAATCTGAATGTACTCCTTA 3011
Query 1081 -------------------------------------------------------------------------- 1080
Sbjct 3012 AAGGTATCTGAGCACCTTTTCAACCTGAATGACTACTCATTTATCTGATAAAGTGATGTAGTTTGGATATTCAA 3085
Query 1081 -------------------------------------------------------------------------- 1080
Sbjct 3086 CCCTGCAAACCTCATGCTGAAATTGGATTCCCAGTGTTGGAGGTGGGGCCTAATGGGAGGTGTTTGGATCCCTC 3159
Query 1081 -------------------------------------------------------------------------- 1080
Sbjct 3160 ATGAATGGCTTCGTTCCATTGGTGGGGTAATGAGTAAGTTCTCGCTCTATATGTCCCTCCCCCACCCCAGAGCT 3233
Query 1081 -------------------------------------------------------------------------- 1080
Sbjct 3234 GGCTGTTAAAACGAGGCTGGCACCTGGCACTTACCCCTACCCCTCAACCCATTCTTGCCCTGTGATCTCTGCTC 3307
Query 1081 -------------------------------------------------------------------------- 1080
Sbjct 3308 ACGTTGCCTCCCTTCATCTTCCTGCATAAGTGGAAGCAGCCTGAAGCCCTCACTGTTTCTTGTACAGCCTGCAG 3381
Query 1081 ------------------------------------- 1080
Sbjct 3382 AGCCGTGAGCCAAATAAAGCTCTTTTCTTTTAAACTA 3418
