Nucleotide Global Alignment
Description
- Query:
- TRCN0000466041
- Subject:
- XR_001752586.1
- Aligned Length:
- 4993
- Identities:
- 1378
- Gaps:
- 3520
Alignment
Query 1 --------------------ATGAGCTGCCCCGTGCCCGCCTGCTGCGCGCTGCTGCTAGTCCTGGGGCTCTGC 54
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 GAGTCCGAGCCGCCGCCGCCATGAGCTGCCCCGTGCCCGCCTGCTGCGCGCTGCTGCTAGTCCTGGGGCTCTGC 74
Query 55 CGGGCGCGTCCCCGGAACGCACTGCTGCTCCTCGCGGATGACGGAGGCTTTGAGAGTGGCGCGTACAACAACAG 128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 CGGGCGCGTCCCCGGAACGCACTGCTGCTCCTCGCGGATGACGGAGGCTTTGAGAGTGGCGCGTACAACAACAG 148
Query 129 CGCCATCGCCACCCCGCACCTGGACGCCTTGGCCCGCCGCAGCCTCCTCTTTCGCAATGCCTTCACCTCGGTCA 202
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 CGCCATCGCCACCCCGCACCTGGACGCCTTGGCCCGCCGCAGCCTCCTCTTTCGCAATGCCTTCACCTCGGTCA 222
Query 203 GCAGCTGCTCTCCCAGCCGCGCCAGCCTCCTCACTGGCCTGCCCCAGCATCAGAATGGGATGTACGGGCTGCAC 276
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 GCAGCTGCTCTCCCAGCCGCGCCAGCCTCCTCACTGGCCTGCCCCAGCATCAGAATGGGATGTACGGGCTGCAC 296
Query 277 CAGGACGTGCACCACTTCAACTCCTTCGACAAGGTGCGGAGCCTGCCGCTGCTGCTCAGCCAAGCTGGTGTGCG 350
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 CAGGACGTGCACCACTTCAACTCCTTCGACAAGGTGCGGAGCCTGCCGCTGCTGCTCAGCCAAGCTGGTGTGCG 370
Query 351 CACAGGCATCATCGGGAAGAAGCACGTGGGGCCGGAGACCGTGTACCCGTTTGACTTTGCGTACACGGAGGAGA 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 CACAGGCATCATCGGGAAGAAGCACGTGGGGCCGGAGACCGTGTACCCGTTTGACTTTGCGTACACGGAGGAGA 444
Query 425 ATGGCTCCGTCCTCCAGGTGGGGCGGAACATCACTAGAATTAAGCTGCTCGTCCGGAAATTCCTGCAGACTCAG 498
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 ATGGCTCCGTCCTCCAGGTGGGGCGGAACATCACTAGAATTAAGCTGCTCGTCCGGAAATTCCTGCAGACTCAG 518
Query 499 GATGACCGGCCTTTCTTCCTCTACGTCGCCTTCCACGACCCCCACCGCTGTGGGCACTCCCAGCCCCAGTACGG 572
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 GATGACCGGCCTTTCTTCCTCTACGTCGCCTTCCACGACCCCCACCGCTGTGGGCACTCCCAGCCCCAGTACGG 592
Query 573 AACCTTCTGTGAGAAGTTTGGCAACGGAGAGAGCGGCATGGGTCGTATCCCAGACTGGACCCCCCAGGCCTACG 646
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 593 AACCTTCTGTGAGAAGTTTGGCAACGGAGAGAGCGGCATGGGTCGTATCCCAGACTGGACCCCCCAGGCCTACG 666
Query 647 ACCCACTGGACGTGCTGGTGCCTTACTTCGTCCCCAACACCCCGGCAGCCCGAGCCGACCTGGCCGCTCAGTAC 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 667 ACCCACTGGACGTGCTGGTGCCTTACTTCGTCCCCAACACCCCGGCAGCCCGAGCCGACCTGGCCGCTCAGTAC 740
Query 721 ACCACCGTAGGCCGCATGGACCAAGGAGTTGGACTGGTGCTCCAGGAGCTGCGTGACGCCGGTGTCCTGAACGA 794
||||||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 741 ACCACCGTCGGCCGCATGGACCAAGGAGTTGGACTGGTGCTCCAGGAGCTGCGTGACGCCGGTGTCCTGAACGA 814
Query 795 CACACTGGTGATCTTCACGTCCGACAACGGGATCCCCTTCCCCAGCGGCAGGACCAACCTGTACTGGCCGGGCA 868
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 815 CACACTGGTGATCTTCACGTCCGACAACGGGATCCCCTTCCCCAGCGGCAGGACCAACCTGTACTGGCCGGGCA 888
Query 869 CTGCTGAACCCTTACTGGTGTCATCCCCGGAGCACCCAAAACGCTGGGGCCAAGTCAGCGAGGCCTACGTGAGC 942
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 889 CTGCTGAACCCTTACTGGTGTCATCCCCGGAGCACCCAAAACGCTGGGGCCAAGTCAGCGAGGCCTACGTGAGC 962
Query 943 CTCCTA--GAC----CTCAC----GCCCAC---------------CATCTTG-------GATT----------- 973
|||||| ||| || || |||||| ||||.|| ||||
Sbjct 963 CTCCTAGTGACTAGGCT-ACTTTTGCCCACTGTAAAAGGCACCGTCATCCTGGTATCAAGATTCTGGAGAGGCC 1035
Query 974 --------------------------------------------GGTTCTCGATCCCGTAC------------- 990
.|.|.||.||||.||.|
Sbjct 1036 AGATTTGAAATCAAGTTTGTTTGAGACGTGGATGACGATGGGGAAGATGTCCATCCTGTGCAGGGTGCAGACAC 1109
Query 991 --CCCAGCT--ACG-CCA---------------TCTTTG----------------------------------- 1009
.|||||| ||| ||| ||||||
Sbjct 1110 TGTCCAGCTGGACGTCCAGGAGGGCATGGGTGTTCTTTGTGGGAGGGAGAGAAGAAGTGAGTCAAGATCACAGG 1183
Query 1010 -------------------------------GCTCGA-------------------------AGAC--CATCCA 1025
||| || |||| ||.|||
Sbjct 1184 CCTCAGAGGAAGCAAAGGGAGCCAACGCCCAGCT-GAGGAAACTGAGATTCAAGGAGTTGGGAGACCTCACCCA 1256
Query 1026 -------------CCTCACTGGCCG------GT----CCCTCCTGCCGGCGCTG----------GAGGCCG--- 1063
|||.||||||.| || ..|||||||.|| |||| ||||.||
Sbjct 1257 CAGTCACGTGGATCCTAACTGGCTGAGATGAGTTTTGGGCTCCTGCTGG-GCTGTTGGGACCCAGAGGTCGGCG 1329
Query 1064 ---AG----CCC----CTCTGGGC----------------------CACCGTCTTTGGCA-------------- 1090
|| ||| |||.||.| |.||.||.|..|||
Sbjct 1330 ACAAGGTCACCCAGGTCTCAGGTCGGTCCCTGTACCTTTATCTCATCCCCCTCCTCTGCATTCCTGAAACCCTT 1403
Query 1091 GCCAG---AG---------CCACCACGAGGTCACCATGTCCT-ACC----CCATGCG---CTCC---------- 1134
.|||| || |||||.|| .||.||.||| ||| |||||.| ||||
Sbjct 1404 CCCAGGACAGCTCCCCTGCCCACCCCG-----CCCTTGACCTCACCTTTTCCATGAGGGACTCCACAGCATGGC 1472
Query 1135 --GT---GCAGCACCGG--------CACTTCCGCCTCGTGCACAA---------------------CCTCA-AC 1173
|| .|||||.||| |||.||..||||.||.|..| ||||| ||
Sbjct 1473 GGGTCACCCAGCAGCGGCCCCCGGACACCTCTCCCTCCTGGATGATGTCCCCTCTCTGGCTCCAGGCCTCATAC 1546
Query 1174 T---------TCAAG----------------------------------------------------------- 1179
| |||||
Sbjct 1547 TCCTCCTGGCTCAAGTACTCTACAGGTGACATTGGACGGGGCCATCATAGACCAGCTGTGTGGGGGTCTGGGGG 1620
Query 1180 ------ATG--------CCCTTTCCCATCGA------CCAGGACT---------TCTACGT------------- 1211
||| ||||.||||...|| ||||.||| |||.|.|
Sbjct 1621 AGTCCCATGGTAAACACCCCTGTCCCCGTGAACCCTGCCAGCACTGGGAGAAGCTCTTCTTAGGATGTCCACTT 1694
Query 1212 -------CTCACC------------------------CACCTTCCA-------------GGA----------CC 1231
||.||| |||| |||| ||| ||
Sbjct 1695 TACAAACCTGACCCTGCACACCCCGCTCTGTGCCCTGCACC-TCCATCCTGAACTATCTGGACACAGCAGTGCC 1767
Query 1232 TCCTGAACCGCACTAC--------AGCTGGT----CAGCCCAC------GGGCTGGTACAAGGACCTCCGT--- 1284
||||| ||.|.||.| |||...| |||||||| || |||.||.|..|||||.|
Sbjct 1768 TCCTG--CCACCCTGCCAGCACCGAGCCCCTCTTCCAGCCCACCCCAGTGG---GGTCCAGGCCCCTCCCTGGA 1836
Query 1285 -CATTACTACTACCGGG-CGCG--------------------CTGG--GAGCTCTACGA------CCGGAGCC- 1327
|.|.|| ||..|||| |.|| |||| |||..|||.|| .|.|||||
Sbjct 1837 GCCTCAC--CTTGCGGGTCACGGTGCACTGCTGAGTCATGTCCTGGATGAGGGCTATGAGCTGCTGCTGAGCCC 1908
Query 1328 ----GGGACCCCCACGAGACCCAGAACCTG--GCCACCGACC-------CGCGCT------TTGC--------- 1373
|.||||..|| |||.|||.||.||.| |||.||..|| .||||| |.||
Sbjct 1909 TGCAGAGACCAGCA-GAGGCCCTGACCCAGCTGCCTCCTGCCAGGCTGGAGCGCTCCATCCTGGCGGCCATGCC 1981
Query 1374 --TC-----AGCTT-----------------------------CTGGAGATGCT-----------------TCG 1394
|| ||||| ||||||||||| .||
Sbjct 1982 AGTCTCCAGAGCTTTCAAAAGACTCCAGGGCCTCGGCCCACCCCTGGAGATGCTGATTTACTTGTCCTGGGGCG 2055
Query 1395 GGACC-------AGCTG-------GCCA------AGTGGCAGTGGGAGACCCAC-----GACCCC--------- 1434
||||| .|||| |||| || ||| ||||| ||||.|
Sbjct 2056 GGACCCAGGGGGTGCTGTTGAGCAGCCAGCGTACAG-GGC---------CCCACTCCAGGACCTCAATATTCAT 2119
Query 1435 --TGGGTGTGCGCCCCCGACGGCGTCCTGGAG-----GAGA-AGCTCT-----CTCCCCAGTGCCA-GCCCCTC 1494
||||| |||..|.|.||..||||||| |||| ||||.| .|.|..||||||| |||.|||
Sbjct 2120 GGTGGGT-----CCCTGGCCTGCAGCCTGGAGTCACCGAGAGAGCTGTTAGAAATGCAGAGTGCCAGGCCTCTC 2188
Query 1495 C---------------------------------------ACAATGAGCTG----------------------- 1506
| .||||||| ||
Sbjct 2189 CCTGGACCTGCTGGCTCCGATCCCCAGGGGACTTGAGTTTGCAATGAG-TGATGGGGGTGCTGAGCTCAACACT 2261
Query 1507 -------------------------------------------------------------------------- 1506
Sbjct 2262 CCTGCTTTCTAGCACTGTGCGTTCCGTGCACTTGAAACTTGGAGCCTCCCATAGGCTGATCTAGAACAATGGTT 2335
Query 1507 -------------------------------------------------------------------------- 1506
Sbjct 2336 TCCTTTTCTTTTTTTTTTTTTTTGAGACAGAGTCTCACTCTGTCGCCCAGGCTGGAGTGCAATGGCTCAATCCC 2409
Query 1507 -------------------------------------------------------------------------- 1506
Sbjct 2410 GGCTCACTGCAACCTCTGCCTCCGGGGTTCAAGTGATTCTCCTGCCTCAGCCTCCTGAGTAGCTGGGATTACAG 2483
Query 1507 -------------------------------------------------------------------------- 1506
Sbjct 2484 GCACCTGCCACCACGCCCAGCTAAGTTTTTTGTATTTTTAATAGAGACAGGGTTTCACCAGGTTACCCAGGCTG 2557
Query 1507 -------------------------------------------------------------------------- 1506
Sbjct 2558 GTCTCGAACTCCTGACCTCAGATGATCCACCCGCCTCGGCCTCCCAAAGTGTTTGGATTACAGGTGTGAGCCAC 2631
Query 1507 -------------------------------------------------------------------------- 1506
Sbjct 2632 CATGCTCGGCCTAGAGCAGTGGTTTTCAATGGAGCAAGGCAGGGGGCAATGTCACTCCCCAGGGAGGGTGACCA 2705
Query 1507 -------------------------------------------------------------------------- 1506
Sbjct 2706 GCTGTCCCTGCTTGCCCAGGACCGAGGGGCTTCCCTGCAAGTGGGGCTTTCAGTGCTAAGACCAAGACAGTCCT 2779
Query 1507 -------------------------------------------------------------------------- 1506
Sbjct 2780 AGGAGAACCAGGGGACCCTTGGCAACCTATAGAGACATTTCTGGTTGTCACAGCTGGGGCATGGGAGTAGTCCC 2853
Query 1507 -------------------------------------------------------------------------- 1506
Sbjct 2854 GGCATCCTGGGTAGGGCGGCCAGGGATGCTGCTCTATATCCTGCAGTGCCCAGGACGGCCCCACCACAGACGGG 2927
Query 1507 -------------------------------------------------------------------------- 1506
Sbjct 2928 GATCCAGCCCCAAACGTCCATGGTACCAAAGCTAAGAAACCCAGAGCTAAGAAACCCAGATCTAGAATGTTCTA 3001
Query 1507 -------------------------------------------------------------------------- 1506
Sbjct 3002 GAATGAACATTTCATTTGCAATATATAAAGCATCCATCACAAAGAAACAACATCTTCAGCAGTGATCTTGGCAG 3075
Query 1507 -------------------------------------------------------------------------- 1506
Sbjct 3076 GCTTCCCTCCTTAGGGGGGTCTCACCACGCCCACCCTCTATTGCTGGGCAGGAGGAGGAAGCCGAGGCAGGCTG 3149
Query 1507 -------------------------------------------------------------------------- 1506
Sbjct 3150 GGTGCCATTTCCCTGTGGGCCTCTCTGGGGACGCACCGAGCTCGAGGCAGCTGCTCACCTGGAGTAGTTGGGGA 3223
Query 1507 -------------------------------------------------------------------------- 1506
Sbjct 3224 TGGTGCCGTGCGCGGCAGTATCCTTCATGGTGTAAGAGTTCACGCGGTGGGCATGCCAGCAGCCGCAGCCCTGG 3297
Query 1507 -------------------------------------------------------------------------- 1506
Sbjct 3298 AACATGGTGTCGGTGACGTGCAGGACCTCGTTGCAATGCACCTGCAGCTCCCCTTTGGCCCTGCCCTCCATGGC 3371
Query 1507 -------------------------------------------------------------------------- 1506
Sbjct 3372 CAGGTTGACCCGGATGTAGAATGAGTCCCCCGAGGTCGCCACTTTGGCCTCCAGGTCCTGGAGTAGCCTCTTAT 3445
Query 1507 -------------------------------------------------------------------------- 1506
Sbjct 3446 AACCTGATAAAAGGGGACATGAGCCACAGATGAGCCACAGATACGAGCCTCTGCGAGGAAGGTTGCAGAAAATT 3519
Query 1507 -------------------------------------------------------------------------- 1506
Sbjct 3520 AAAGTAGGAGAGAAGGAAGGACCCTCCCAGTCTCAGAAGCTGCTCTGGCACTGGAGTCAGTGGGTGGGAGGTTT 3593
Query 1507 -------------------------------------------------------------------------- 1506
Sbjct 3594 CCAGCTGGCTTGGGGGCCTCCTGGGGACCTGGGGCACAGCCTGGCTGATCCTCTCTTGGCTCTGGGGGTCCCTG 3667
Query 1507 -------------------------------------------------------------------------- 1506
Sbjct 3668 GCTGCTGGGCGTGCAGAAGAACCACCAGGGACTTAAGGGTCATGGAGTCTGGCCAGGCAGCTGTGCACACGAGA 3741
Query 1507 -------------------------------------------------------------------------- 1506
Sbjct 3742 GGAGTGGTATGTGTACCGTCCGTGTTGACCTTCACAGACAGGCAGCAGAAGCCGTCCACCCTCCTGAGAAGCCC 3815
Query 1507 -------------------------------------------------------------------------- 1506
Sbjct 3816 CACGGCCTCCTCCAGGGTCGTGTCCTCCAGGACTGCCTTGAACAAGGGCTCTGAGGCTTCGTAATCAACCTGAG 3889
Query 1507 -------------------------------------------------------------------------- 1506
Sbjct 3890 GGCAAGTCGAGAAGGTCAGTCTCTTTCCCCCGGGACTCTGAATCCAGCCAGAAGACAGAAGGCGCTGAGGGCAC 3963
Query 1507 -------------------------------------------------------------------------- 1506
Sbjct 3964 TGAGGCGAGGCGCGGGCCAGCCCTGCCGTAGGACCACTGCCTGCACGCCTTGGTCAAAACAAAGCCACACACCA 4037
Query 1507 -------------------------------------------------------------------------- 1506
Sbjct 4038 GAGCCTCTGTGGGGCCTTCACACCTCTAGTGATGCGTGCTACACATAGTGCTGGCCAGAGAGTCAACTGCCAAC 4111
Query 1507 -------------------------------------------------------------------------- 1506
Sbjct 4112 CCTTCCCCAGTCGAGATCGGGGGTTCTTTGTGATAAGCACTTTCCTGTCTTGAAAAAGAAAAGAAAAGAAAAGA 4185
Query 1507 -------------------------------------------------------------------------- 1506
Sbjct 4186 AAGAACCTCGGTTCTAGAACATTCAAGAGCATTCTAGATAGAGGTTTCTTAGCCTTGGGATCATTCTGTGCTGC 4259
Query 1507 -------------------------------------------------------------------------- 1506
Sbjct 4260 TGCGGGCTATACCGGGCCCTACAGGATGCTGAGTGGCATCCCTGGCCTTCACCTACCCGATGCCCTGGCTCTCC 4333
Query 1507 -------------------------------------------------------------------------- 1506
Sbjct 4334 ACCCACAGCCTTCCCCACTGTGAAGGCCCACCCCCCAGGGCTTCCACCATCCACTTCATTTCTTCTCAATATTG 4407
Query 1507 -------------------------------------------------------------------------- 1506
Sbjct 4408 TTCTAAGCTTAGGAGAGTAGATATTTTTACAATAAAAATTAAGATGTGTTTTAACACCATTAGAATCTAATTGG 4481
Query 1507 -------------------------------------------------------------------------- 1506
Sbjct 4482 CCCCCTTAGGATATCGGGACTATCTCCCTGAACATCGTCAAGGGGCTCTGTTGCTTGAACTACCTCAGAGCTGA 4555
Query 1507 -------------------------------------------------------------------------- 1506
Sbjct 4556 TAATTGGGAACCTTAAGAGCAGGGTTCCCCAACCCCTGGGCCACATACTGGTACTGGTCCATGGTCCATCAGGA 4629
Query 1507 -------------------------------------------------------------------------- 1506
Sbjct 4630 CCCGGGTCACACAGCAGGAGGGGCGTGGTGGGCAAGTGAGCATTACGGCCTCAGCTCCACCTCCTGTCAGCTCA 4703
Query 1507 -------------------------------------------------------------------------- 1506
Sbjct 4704 GCACAGCAGTAGATTCTCAGAGGAGCATGAGCCCTATCGTGAACTGTGCAAGTGAGGGATCTAGGTTTCACGCT 4777
Query 1507 -------------------------------------------------------------------------- 1506
Sbjct 4778 CCTTATGAGAATCTAATTCCTGATGATCTGTTACCGTCTCCCATCACCCCCAGATGGGACCGTCTAGTTGCAGG 4851
Query 1507 -------------------------------------------------------------------------- 1506
Sbjct 4852 AAAACAAGCTCAGGGCTCCCACTGATTCTGAATTATGGTTCAGTGTATGATTCTTTCATTACATATTACAGTGT 4925
Query 1507 ----------------------------------- 1506
Sbjct 4926 AATAATAATAGAAATAAAGTGTACAATCAATGTAA 4960
