Nucleotide Global Alignment
Description
- Query:
- TRCN0000466194
- Subject:
- NR_135758.2
- Aligned Length:
- 5921
- Identities:
- 1060
- Gaps:
- 4861
Alignment
Query 1 -------------------------------------------------------------------------- 0
Sbjct 1 GTCCCCCGCTTGGCTTCCAGCGCCGCTTGCGCTCCGGAGCGCTGGCTCTGCTGGCGCTGAGAAATGGACCAATT 74
Query 1 -----------------------------------------------ATGGCGTCCGAACTTTGTAAGACGATC 27
|||||||||||||||||||||||||||
Sbjct 75 TTGACAAGATATAGTGCTGCAGCGTGCCTGATGGGATATATTCAGTCATGGCGTCCGAACTTTGTAAGACGATC 148
Query 28 TCTGTGGCAAGGCTAGAAAAGCACAAGAATTTGTTCTTAAATTATAGGAATCTGCACCATTTTCCATTGGAGTT 101
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 TCTGTGGCAAGGCTAGAAAAGCACAAGAATTTGTTCTTAAATTATAGGAATCTGCACCATTTTCCATTGGAGTT 222
Query 102 ACTGAAAGATGAGGGACTGCAGTACTTGGAGAGACTCTATATGAAAAGGAACTCCCTGACATCCTTGCCAGAAA 175
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 ACTGAAAGATGAGGGACTGCAGTACTTGGAGAGACTCTATATGAAAAGGAACTCCCTGACATCCTTG------- 289
Query 176 ACCTTGCTCAGAAGCTTCCAAACCTTGTGGAACTATACCTGCACTCAAATAACATAGTTGTGGTTCCGGAAGCC 249
||||||||||||||||||||||||||||||||||||||||
Sbjct 290 ----------------------------------ATACCTGCACTCAAATAACATAGTTGTGGTTCCGGAAGCC 329
Query 250 ATTGGGTCTCTTGTAAAACTCCAATGTCTGGATCTTAGTGACAATGCCTTAGAAATTGTTTGCCCAGAAATTGG 323
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 330 ATTGGGTCTCTTGTAAAACTCCAATGTCTGGATCTTAGTGACAATGCCTTAGAAATTGTTTGCCCAGAAATTGG 403
Query 324 TCGTCTGAGAGCTTTACGTCATCTTCGATTAGCTAATAACCAACTGCAATTCCTACCTCCAGAGGTTGGCGATT 397
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 404 TCGTCTGAGAGCTTTACGTCATCTTCGATTAGCTAATAACCAACTGCAATTCCTACCTCCAGAGGTTGGCGATT 477
Query 398 TGAAGGAGCTGCAGACACTAGACATTTCTACCAATCGTTTGCTAACTTTACCCGAGAGGCTTCACATGTGCCTT 471
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 478 TGAAGGAGCTGCAGACACTAGACATTTCTACCAATCGTTTGCTAACTTTACCCGAGAGGCTTCACATGTGCCTT 551
Query 472 TCTCTGCAGTACCTCACTGTGGACCGAAATCGTCTATGGTATGTGCCGCGCCATCTCTGCCAGCTGCCCAGCCT 545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 552 TCTCTGCAGTACCTCACTGTGGACCGAAATCGTCTATGGTATGTGCCGCGCCATCTCTGCCAGCTGCCCAGCCT 625
Query 546 CAATGAGCTCTCCATGGCTGGAAACCGTCTTGCATTTTTGCCACTTGATTTAGGTCGATCTCGAGAACTACAGT 619
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 626 CAATGAGCTCTCCATGGCTGGAAACCGTCTTGCATTTTTGCCACTTGATTTAGGTCGATCTCGAGAACTACAGT 699
Query 620 ATGTATACGTGGATAACAACATTCACCTGAAAGGCTTGCCATCTTATCTGTACAATAAAGTCATCGGGTGCAGT 693
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 700 ATGTATACGTGGATAACAACATTCACCTGAAAGGCTTGCCATCTTATCTGTACAATAAAGTCATCGGGTGCAGT 773
Query 694 G---------------------------------------------------------------------GCTG 698
| ||||
Sbjct 774 GGGCTTCTGTACTGCTGCACATGCTGTTCCCTCTGCTTGGAATGCTCATAACACATTTCCATTTATTCCAGCTG 847
Query 699 TGGTGCTCCCATTCAAGTTTCCGAGGTGAAGCTGCTTTCCTTTTCATCAGGGCAGCGAACCGTTTTCCTCCCAG 772
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 848 TGGTGCTCCCATTCAAGTTTCCGAGGTGAAGCTGCTTTCCTTTTCATCAGGGCAGCGAACCGTTTTCCTCCCAG 921
Query 773 CTGAGGTGAAGGCCATAGGGACGGAGCATGATCACGTCCTCCCTCTGCAGGAATTGGCTATGAGAGGGCTGTAT 846
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 922 CTGAGGTGAAGGCCATAGGGACGGAGCATGATCACGTCCTCCCTCTGCAGGAATTGGCTATGAGAGGGCTGTAT 995
Query 847 CATACCTACCACAGCTTGCTGAAAGATTTGAACTTTCTGTCTCCAATCTCATTACCCAGAAGTCTCCTAGAGCT 920
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 996 CATACCTACCACAGCTTGCTGAAAGATTTGAACTTTCTGTCTCCAATCTCATTACCCAGAAGTCTCCTAGAGCT 1069
Query 921 GCTGCACTGCCCTCTGGGGCACTGTCATCGGTGTAGTGAGCCTATGTTTACCATCGTCTACCCCAAGCTCTTTC 994
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1070 GCTGCACTGCCCTCTGGGGCACTGTCATCGGTGTAGTGAGCCTATGTTTACCATCGTCTACCCCAAGCTCTTTC 1143
Query 995 CCTTGAGAGAGACGCCAATGGCAGGGCTGCACCAGTGGAAGACAACTGTTAGTTTTGTGGCTTACTGCTGCTCC 1068
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1144 CCTTGAGAGAGACGCCAATGGCAGGGCTGCACCAGTGGAAGACAACTGTTAGTTTTGTGGCTTACTGCTGCTCC 1217
Query 1069 ACCCAGTGTCTGCAGACTTTTGACCTGCTGAGT----------------------------------------- 1101
|||||||||||||||||||||||||||||||||
Sbjct 1218 ACCCAGTGTCTGCAGACTTTTGACCTGCTGAGTTGATAAACACTCAAGAACCTCAGGAGCGCTGCCAGCTTGAC 1291
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 1292 ACTGGGGAATCCAGCCAGTCCAGCACACTCTTCCATCCTGTCCTGTCCAATGCGGGGGCACTGCAGAACTCTCT 1365
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 1366 AGAAATGTCATGATTGAGCTTCAGAGCTAAAATGCCTTCACCCTTCCCCCAAGTTGGAATATATCCTCCCCCAA 1439
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 1440 ATTAAGGACCCATTTGTCTTCTGTGTTTTTCCTTTTTATGTGAGTGTGTCTTTTACAGAAACCATTTAGATTGA 1513
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 1514 TGGGCCTCCCCAAATCTAATTTAAAGCAAGTTTCCGGTCCTTGGAGAACAGTGACTTGATCATCTAGCCAGATT 1587
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 1588 CCCTTTTGAACACACATACCTTCAGTGATGCTTCCTCTCCTCTCCCCTCCCTTGCTTTCCCCAGAGAGTTATTT 1661
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 1662 CCCTGAGACCATGTTCTCCACAGTGTCTCCAGTGGAAACTTGTCAGTTTTTGAGGAGTTTCAGCAAACCCCGTG 1735
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 1736 GCCTCAATGGTCTTGAGTAGCAGGGTGGGGCGCCTGAGTTGGCAGCAAAGTGAGGCTCCCATGGAGGCTCAGTG 1809
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 1810 AGGGTCCCAGAGCACACACCCTCTGGAAAGTTCCAGCCTTGTTTATACGTTCTACAGTGTAGCAACAGACTTTT 1883
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 1884 GTGAGGGATTTTAAAAACAAAAATGTAGATTGTAATGAAATACACTTCCTGTTTTTTAAAAGTGTTTGCAGAAA 1957
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 1958 AATGATTTTTGAAGTTTTTAAATTTCCTGATAAGATTTTTTTTATATGAGAAGAATTTGAGGAATATTTGAAGC 2031
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 2032 TTTACAAGATCTGATTTTTTTCTTTCTCAATATAAAGTTTCCATACAATGAGAAAGGGGGAGAAAACACACATT 2105
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 2106 GAAATAAGACCTCCGTGTTCTTTTTTGATGGGTTTATGATTCAGTTTATACTGACTTTGAAATATTTTTGTCAC 2179
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 2180 ATGTGAAAGGCTTCAGCTACTTCCACTACTGGTTTTTTTTTGTTGTTGTTGAGACGGAGTCTCGCTCTGTCGCC 2253
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 2254 CAGGCTGGAGTGCAGTGGCGGGATCTCGGCTCACTGCAAGCTCCGCCTCCCGGGTTCACGCCATTCTCCTGCCT 2327
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 2328 CAGCCTCCCAAGTAGCTGGGACCACAGGCGCCCGCCACCACGCCCGGCTAATTTTTTGTATTTTTAGTAGAGAC 2401
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 2402 GGGGTTTCACCGTGTTAGCCGGGATGGTCTCGATCTCCTGACCTCGTGATCCGCACGCCTCGGCCTCCCAAAGT 2475
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 2476 GCTGGGATTACAGGCGTGAGCCACCGCGCCCGGCCCACTACTGGTTTTTAACAGGATGATTCAAAGTACAGCCC 2549
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 2550 GTGCACATTTACTTCGTCACCTGGTGCACCACACTGTCTTCATGTTGGCCCTCGTTTCTTGTATACTTAGCTTA 2623
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 2624 CTGCCCAGATGCAACTGAGAAAATACAGGAAAAGCAGGTCCAAATTCAGCCTTCGACTTCTGCAAAAGTCCATA 2697
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 2698 AACAGAAAGTCTGTGAGCCTCCACCCTGCCAGAAAGAACTCTTCATGAAGAAGTCACGTATTTGCTCTTCCTTT 2771
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 2772 CAAAGGATGGCATTTTAATGTTGCTTTGCTGCCAGATGTTCATCTGCTTGCTGTGAAGTGATTCTTTTTTTAAA 2845
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 2846 ATGTTTTTTAATGATGTAAGTTTTCTAAAAGGCAGGGCTGAATGGAGAACCAAGAATTTGCTTGGTAGAAAAAT 2919
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 2920 TATTTTTTTTTAATTTCAGACTTATCAAAAATTTGGTTGAGGGAATTTTTATTAGCTGCCCTGACTTTATAATG 2993
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 2994 CTACGCTCTTAACAGTGCCAAAAATCCTACATAGTTACTGACAAATGTGTGATCTTTTTACAGTCACAACACCT 3067
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 3068 GCTGCCCGGAAAGCACACCGTCCACGTAGAATGGAGAAGGCAGAAAGTTACCGTGTGTTCCCACTGTATCTGCA 3141
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 3142 CTGTTCTTACTTCCTCTTGTCCCTTTTCATATCTTGGTCTATTCAGCCTTAACATTTCAAAGGCTTATAGTAAA 3215
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 3216 ATAGGAACTGAAGATCTGTATCAAAATGTAACACTTTCATCCTTTGGAATAATTGAAGTTTAACATAACCTCTA 3289
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 3290 CATGTATATAAGTTAGCTGGTGAAAATGTGGCATGAAACTTCACAATTGTGCTTCAGGCCTAAGTGACTGCTAC 3363
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 3364 CTATGATTTAAGTGACAGTAAATGTCTTGCTACATTTTTCTATTTCATCCTCTACAATCATATGTCATGGAATG 3437
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 3438 GAGCTATGAAATGTGCTAACTTGGTATTCAGGATTCTCATTGTGATAAGGTGATACATTAGTTTTACCTTGTTT 3511
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 3512 GAAATTTTACAAAAATGCTTACAATCCAGGCATTCTTTCTCTACCTATTATGAACTACGGTGTGTTAAACAACA 3585
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 3586 GCAGTGGGCTGGGCAGACAACCTTTGGGCAGTCTCAACCTTAATCCTTGGGTACAGCACCTGAACTTAATTGAT 3659
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 3660 GAGAAGTGGAACTTAAGTGGTTTCCCTGGTGCTGTTCATTATGGAAATTTTATGCTGGATTTATCGATGTCATT 3733
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 3734 CTTAATCTTTTGATACTATAAAGGAGTCTTACCAACTGGAGAAAATTTGCCTACATGCTATATATTTGAATTGT 3807
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 3808 GTCCAAAGCTTTGCAGAAAAGCAAATCTGAAGTTATTATATATGTTGTTTTCTTGAGCAACAGTTACACTAGGT 3881
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 3882 AGAAAAGTATTCACACAATAATAGTAATGCAAAAAAAGTGAGCTACTTGGAAAGTATCATCTCTGTTCAGGTAA 3955
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 3956 GTTTACTTCAGTGAACTCTTGTGTGGTTAGCGATAAGTTTTAAAGTCCAGGATAGCCTCATGAGCATAGGCCTT 4029
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 4030 CCTATGAAGTAGTGCAAAGGGGGCCGATTTTAGTGGATTACCCTATCAGTGTTCTTCAGTATGTCCAATTGTTA 4103
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 4104 TCATACCAAAAACCTTAATTACATAACATTGTGTGGATGAAATGCTGCATCTTCAGTTAATACATGTTTTGAGC 4177
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 4178 ACATTCTTAAAATACATAATAATTAAATGATCCCTATTCAAAAGAACCCTGGCTTGGGTGGAGGATCCACTCTG 4251
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 4252 GCTAACGGATAAGAGTGATGAACTTCTTTGTTACCTGACCCTTCTCTTCTGGAAAAGTGAGGTGTACATTAAAC 4325
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 4326 ATCTTTTGGTCACCGTGCCTCACTAAGACCTTTCACATTCCAGCTTGTCCGACTAGTGTAATGTACCTCTCACT 4399
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 4400 TCTGTTTTACGTTGAGCATTACGAATTAAAATCTTTACAGTCTAGGGGGAAAAAAAGGCTTCAATACCAGTTGG 4473
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 4474 CTTATGAGGCTCTGCATATAATTTTCTCTAAAATATGTAACTATTTTGTAGTCTGTGGGGACTTTCAAAGCCAA 4547
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 4548 TTTTTAAAATTAGTAGTAGTAAAGGTTTTTCCCTTTCCTGAATGAAAAATCAGAAATTCTAATCTTTGCTATAA 4621
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 4622 AGTACTTAAACACAATACATTGCCTCAGCATAAATAAAAACATTTTTATTAAGATGATTTATGAACATGGATTT 4695
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 4696 CTAACTGGACCAACACTAATGTTGCAACCTGATAAAATTTGAGATGTAAATTCATTTCACAGACTCATAAACAC 4769
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 4770 ACTCTCTTTAAGACTCTTCTTTAAATGGATCCTTACATTACCCTGCCTGTTTTATTATGCCTTCATTTTTGTGG 4843
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 4844 TTTTCATTCACTCCTGCTTGCTTCTATTGAGGTTCTCCTACATTTCCCAGAAACTCAGTGAATATCTTGCCTTT 4917
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 4918 TCTTCAAACAAAGGGGGTTTTTATAAAGTTTGTATTTTTGAAACTAGCTCTATGTCTATCTAAAAATCAAGTCT 4991
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 4992 CGGCAGTGGCTCATGCCTATAATCCCAGCACTTTGGGAGGCCGAGGAGGGCAGATCATCTGAGGTCAGGAGTTT 5065
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 5066 GAGACCAGCCTGGCCAGCATGGTGAAACCCCATCTCTACTAAAAATACAAAAAATTAGCCAGGCGTGGTGGCGC 5139
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 5140 GCACCTGCAGTCCCAGCTACTCGGGAGGCTGAGGCAGGAGAATTGCTTGAACCCGGCAGGAAGAGGTTGCATTG 5213
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 5214 AGCTGAGATCACGCCATTACACTCCAGCCTGGGCAACAGAGCGAGACTCCGTCTCAAAAAAAAATCATTCAAGT 5287
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 5288 TTCACTGTGCCTACAGTGAGGAGCTACCTCCTTGTGTCATCAGCTAATAGATCTGAAAGTGATGCCGGTGTCTC 5361
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 5362 TAGGAAAGGAATTGATCATAGCCAAGTGACTGACATTCTCTCGGTCAGGAAAAGAGCTTGCTTCACAGCCTTTG 5435
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 5436 AAGTATGACTGTATGTGTGGTCCCCTTGTACTTTGGAGACAGAAGGTACTGGCAGCGAGTGTGGTGGATGGGCA 5509
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 5510 GAAGGTGTAGCATTCGGAGATTATTTCTGTATGTAATTAAGAGACTTTCAAGGGTTAGCCAGACTTTTTTCCAC 5583
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 5584 TCAAGTGTGGATTATCTTTGCTACCTGTGTTAAAGAATATCAGGTTTTGTTTCTTATTGTGATTTTTGAGTCTA 5657
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 5658 AATGATCCAAGATTTTTAAAATAGATACATAATGAAATCCAGGCCTCTGAAAAATTATGGCAACATTCATTTGG 5731
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 5732 AGTGTGGCTAAAAACTCATACTTTATCCAATTTGGTTGCCTCTCTCAGTTACTGCAGTTTATAGAATAATTGAG 5805
Query 1102 -------------------------------------------------------------------------- 1101
Sbjct 5806 CTTGAACCATGTGAATGCTCAGAATGTCAATGGTGGAGTATTTATTCAAGAGAAATGGCTGAATCTCGATACGA 5879
Query 1102 - 1101
Sbjct 5880 A 5880
