Nucleotide Global Alignment

Description

Query:
TRCN0000466541
Subject:
XM_011238603.2
Aligned Length:
2609
Identities:
2224
Gaps:
34

Alignment

Query    1  ------------------------ATGATGAGCATCAAAGCCTTTACGCTT-GTCTCTGCTGTGGAGCGGGAGC  49
                                    |||||||.||||||.|||||.|| ||| ||||||||.|||||.|||||.|
Sbjct    1  ATGATCTCAGATCACCCGGTAGACATGATGAACATCAAGGCCTTCAC-CTTGGTCTCTGCAGTGGAACGGGAAC  73

Query   50  TGCTGATGGGCGACAAGGAGCGCGTCAACATAGAGTGCGTGGAGTGCTGCGGCAGGGACCTCTACGTGGGCACC  123
            |||||||||||||||..||.|.|.|||.|||.|||||.|||||||||||.||||||.|.||.||.||.||||||
Sbjct   74  TGCTGATGGGCGACAGAGACCACATCAGCATTGAGTGTGTGGAGTGCTGTGGCAGGAATCTTTATGTCGGCACC  147

Query  124  AACGACTGCTTCGTCTACCACTTCCTGTTGGAGGAG-AGGCCAGTGCCTGCTGGGCCAGCCACGTTCACTGCCA  196
            ||.|||||||||.|.|||||.||||||.|||||||| |||||| |||||.|.|||.||||.||.|||..|||||
Sbjct  148  AATGACTGCTTCATTTACCATTTCCTGCTGGAGGAGAAGGCCA-TGCCTACAGGGACAGCTACATTCGTTGCCA  220

Query  197  CCAAACAGCTGCAGAGACACTTGGGCTTCAAGAAGCCCGTGAACGAGCTGCGCGCGGCCTCAGCACTCAACAGG  270
            ||||||||||.||.||||||.|||||||||||||.||.||||||||||||.|.|||||||||||.|||||.|||
Sbjct  221  CCAAACAGCTACACAGACACCTGGGCTTCAAGAAACCTGTGAACGAGCTGTGTGCGGCCTCAGCTCTCAATAGG  294

Query  271  CTGCTGGTGCTGTGTGACAACTCCATCAGCCTGGTCAACATGCTGAACCTCGAGCCAGTGCCTTCGGGGGCCCG  344
            |||||||||||.|||||||||||.||.|.||||||.||||||||||||||.||||||||.||.||.||.|||||
Sbjct  295  CTGCTGGTGCTCTGTGACAACTCTATAACCCTGGTTAACATGCTGAACCTGGAGCCAGTCCCCTCAGGAGCCCG  368

Query  345  CATCAAGGGGGCAGCCACGTTTGCACTGAACGAGAACCCTGTGAGTGGGGACCCCTTCTGTGTAGAAGTTTGCA  418
            ||||||.|||||..|.||.||||||.|||||||||.|||.||||.|||||||||.|||||.||.||.||.||||
Sbjct  369  CATCAAAGGGGCTACAACATTTGCAGTGAACGAGAGCCCCGTGAATGGGGACCCGTTCTGCGTGGAGGTGTGCA  442

Query  419  TCATCTCTGTCAAACGCAGAACCATCCAGATGTTTCTGGTGTACGAGGACCGGGTGCAGATCGTCAAGGAGGTG  492
            ||||.||.||.||.|||||.||..||||.||||||||||||||.||||||||.||||||||.||||||||.|||
Sbjct  443  TCATTTCCGTGAAGCGCAGGACTGTCCAAATGTTTCTGGTGTATGAGGACCGAGTGCAGATTGTCAAGGAAGTG  516

Query  493  TCGACTGCCGAACAGCCCCTCGCTGTGGCTGTGGACGGCCACTTCCTGTGTCTGGCTCTGACCACTCAGTACAT  566
            ||.||..|.||.|||||.||.||||||||||||||.|||.|.|||.||||.|||||..|||||||.||.|||||
Sbjct  517  TCCACCCCAGAGCAGCCTCTTGCTGTGGCTGTGGATGGCTATTTCTTGTGCCTGGCCTTGACCACACAATACAT  590

Query  567  CATCCACAATTACAGCACAGGCGTCTCCCAGGACCTTTTTCCCTACTGCAGTGAGGAGAGGCCGCCGATCGTCA  640
            |||||..||.||||||||||||.|.|||||||||||.||||||||||||||||||||||.|||.||.|||||||
Sbjct  591  CATCCTGAACTACAGCACAGGCCTTTCCCAGGACCTGTTTCCCTACTGCAGTGAGGAGAAGCCACCCATCGTCA  664

Query  641  AGAGGATAGGGAGACAGGAGTTCCTGCTGGCGGGCCCCGGAGGGCTGGGCATGTTTGCCACAGTCGCAGGGATA  714
            ||||||||||.||||||||||||||||||||.|||||.|||||..||||||||||||||||.||.||.|||||.
Sbjct  665  AGAGGATAGGCAGACAGGAGTTCCTGCTGGCTGGCCCAGGAGGCTTGGGCATGTTTGCCACCGTGGCCGGGATT  738

Query  715  TCCCAGCGTGCCCCCGTGCACTGGTCGGAGAATGTGATTGGGGCGGCTGTGTCCTTTCCATACGTCATAGCGCT  788
            ||||||||||||||.|||||||||||.||.||||||||||||||.|||||.|.|||.||.||.|||||||||||
Sbjct  739  TCCCAGCGTGCCCCTGTGCACTGGTCAGAAAATGTGATTGGGGCAGCTGTTTGCTTCCCCTATGTCATAGCGCT  812

Query  789  CGATGACGAATTCATCACAGTCCACAGCATGTTGGATCAGCAACAGAAGCAGACGCTGCCCTTTAAGGAGGGCC  862
            |||||||||||||||||||||.||||||||||||||||||||.|||||.|||||.|||||||||||||||||.|
Sbjct  813  CGATGACGAATTCATCACAGTTCACAGCATGTTGGATCAGCAGCAGAAACAGACCCTGCCCTTTAAGGAGGGGC  886

Query  863  ATATCCTACAGGACTTTGAAGGAAGAGTGATCGTTGCCACAAGTAAAGGAGTTTACATCTTGGTTCCATTACCT  936
            |.|||||.|||||||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||
Sbjct  887  ACATCCTGCAGGACTTTGAAGGAAGAGTGATTGTTGCCACAAGTAAAGGAGTTTACATCTTGGTTCCATTACCT  960

Query  937  TTGGAAAAACAAATACAGGATCTTCTAGCAAGCCGCAGAGTAGAAGAGGCTTTGGTTTTAGCAAAAGGAGCCCG  1010
            .||||||||||||||||||||||..||||||.|||.|||||.||.|||||||||||.||.||||||||||||||
Sbjct  961  CTGGAAAAACAAATACAGGATCTGTTAGCAAACCGGAGAGTGGAGGAGGCTTTGGTCTTGGCAAAAGGAGCCCG  1034

Query 1011  GAGGAACATTCCAAAGGAAAAATTTCAGGTAATGTACAGAAGGATTCTGCAGCAGGCGGGATTTATACAGTTTG  1084
            ||||||||||||||||||.||||||||||||||||||||.|||||||||||||||||.||.|||||||||||||
Sbjct 1035  GAGGAACATTCCAAAGGAGAAATTTCAGGTAATGTACAGGAGGATTCTGCAGCAGGCAGGCTTTATACAGTTTG  1108

Query 1085  CACAACTTCAGTTCCTGGAAGCTAAAGAGCTCTTCAGAAGCGGCCAGCTTGATGTCCGGGAGCTGATCTCTCTC  1158
            |||||||.||||||||||||||.||||||||||||||||||.|||||||.||||||||||||||||||||||||
Sbjct 1109  CACAACTCCAGTTCCTGGAAGCCAAAGAGCTCTTCAGAAGCAGCCAGCTGGATGTCCGGGAGCTGATCTCTCTC  1182

Query 1159  TACCCCTTCCTGTTGCCCACCTCCTCCTCCTTCACCCGGTCCCACCCTCCTCTTCATGAGTACGCAGACCTGAA  1232
            ||||||||.|||.|||||||||||||||||||||||||.||.||||||||||||||||||||||||||||||||
Sbjct 1183  TACCCCTTTCTGCTGCCCACCTCCTCCTCCTTCACCCGCTCTCACCCTCCTCTTCATGAGTACGCAGACCTGAA  1256

Query 1233  CCAGCTGACCCAGGGGGACCAGGAGAAGATGGCCAAGTGCAAACGCTTCCTCATGAGCTACCTGAACGAGGTCC  1306
            ||||||||||||.||.||||||||||||||||||||||||||.|||||||||||||||||||||||.||..|||
Sbjct 1257  CCAGCTGACCCAAGGTGACCAGGAGAAGATGGCCAAGTGCAAGCGCTTCCTCATGAGCTACCTGAATGAAATCC  1330

Query 1307  GCAGCACAGAGGTAGCAAATGGCTACAAGGAGGACATCGACACAGCCTTGCTCAAACTGTATGCAGAGGCTGAC  1380
            ||||||||||||||||.||||||||||||||.|||||||||||.|||||||||||.||||||||||||||||||
Sbjct 1331  GCAGCACAGAGGTAGCTAATGGCTACAAGGAAGACATCGACACGGCCTTGCTCAAGCTGTATGCAGAGGCTGAC  1404

Query 1381  CACGACAGCCTGCTGGACCTCCTGGTCACTGAGAACTTCTGTCTT-CTGACGGACAGTGCTGCCTGGCTAGAGA  1453
            |||||||||||.|||||||||.|||||||||||||.||||| ||| |||||.|||||||||||||||||.||||
Sbjct 1405  CACGACAGCCTCCTGGACCTCTTGGTCACTGAGAATTTCTG-CTTGCTGACAGACAGTGCTGCCTGGCTGGAGA  1477

Query 1454  AGCACAAAAAGTATTTTGCACTTGGACTGCTCTATCATTATAATAACCAAGATGCTGCTGCAGTTCAGTTGTGG  1527
            |||||||||||||.||||||||.||.||||||||||||||.||.||.||||||||..||||.||||||||||||
Sbjct 1478  AGCACAAAAAGTACTTTGCACTGGGGCTGCTCTATCATTACAACAAACAAGATGCCTCTGCGGTTCAGTTGTGG  1551

Query 1528  GTGAACATTGTGAATGGCGATGTCCAGGACTCCACACGCTCAGACCTGTATGAATACATCGTGGATTTTCTTAC  1601
            |||||||||||||||||.||..||||||||||.||||||||.||||||||||||||||||||.|||||.|||||
Sbjct 1552  GTGAACATTGTGAATGGGGACATCCAGGACTCTACACGCTCGGACCTGTATGAATACATCGTTGATTTCCTTAC  1625

Query 1602  CTACTGCTTAGACGAGGAACTAGTGTGGGCCTATGCTGATTGGGTCCTGCAGAAAAGTGAAGAGGTCGGAGTTC  1675
            |||||||.|||||.|.||.||.||||||.||.|||||||.|||.|.||||||||||||||.|||.|.|||||||
Sbjct 1626  CTACTGCCTAGACCAAGAGCTGGTGTGGACCCATGCTGACTGGCTGCTGCAGAAAAGTGAGGAGATTGGAGTTC  1699

Query 1676  AGGTTTTCACCAAGAGACCTTTGGATGAACAGCAGAAGAACAGTTTTAATCCAGACGACATTATCAATTGCCTT  1749
            |..||||||||||||||||||||||.||.||||||.|||..|||||||||||||||.|||||||.|.||.||||
Sbjct 1700  AAATTTTCACCAAGAGACCTTTGGACGAGCAGCAGCAGACTAGTTTTAATCCAGACAACATTATTAGTTCCCTT  1773

Query 1750  AAAAAATACCCTAAAGCCCTTGTGAAGTATCTGGAACATCTTGTGATAGACAAGAGACTGCAGAAAGAAGAGTA  1823
            ||.|||||||||||||||||.||.|||||||||||||||||.|||||.||||.||||.||||||||||||||||
Sbjct 1774  AAGAAATACCCTAAAGCCCTGGTTAAGTATCTGGAACATCTCGTGATCGACAGGAGATTGCAGAAAGAAGAGTA  1847

Query 1824  TCACACCCACTTAGCTGTGCTGTACCTGGAAGAGGTGCTGCTGCAGAGGGCCTCCGCCAGTGGCAAGGGTGCAG  1897
            .|||||||||.|.||..|.||.||||||||.||.|||||||.||||||||..|||.|..|.|||||.|.||.||
Sbjct 1848  CCACACCCACCTTGCCATCCTCTACCTGGAGGAAGTGCTGCGGCAGAGGGTATCCACTGGGGGCAAAGATGTAG  1921

Query 1898  AGGCCACCGAGACGCAGGCCAAGCTGCGGCGGCTGCTCCAGAAATCTGATTTATACCGAGTCCACTTTCTTCTC  1971
            |.|||||.|||||.||||||||.||.|||.|.||.||||||||.|||||.||.|||||.||||||||..|....
Sbjct 1922  AAGCCACTGAGACACAGGCCAAACTCCGGAGACTACTCCAGAAGTCTGACTTGTACCGCGTCCACTTGTTGAAA  1995

Query 1972  GAGAGGCTGCAGGGAGCTGGCCTGCCCATGGAGAGCGCCATCCTGCACGGGAAGCTGGGCGAGCATGAGAAGGC  2045
            ||||...|.|||||.||.||||||||||||||.||.||||||||.||||||||||||||||||||.||||||||
Sbjct 1996  GAGAAAGTCCAGGGTGCCGGCCTGCCCATGGAAAGTGCCATCCTCCACGGGAAGCTGGGCGAGCACGAGAAGGC  2069

Query 2046  GCTGCATATCCTGGTGCACGAGCTGCAGGACTTTGCAGCGGCCGAGGACTACTGCCTGTGGTGCTCCGAGGGCC  2119
            .|||||.|||||||||||||||.||..||||||..|.||.||.||||||||||||||||||.||||||||||.|
Sbjct 2070  CCTGCACATCCTGGTGCACGAGATGGGGGACTTCTCTGCAGCTGAGGACTACTGCCTGTGGAGCTCCGAGGGTC  2143

Query 2120  GAGACCCACCCCACCGCCAGCAACTCTTTCACACGCTGCTGGCCATCTACCTGCATGCTGGCCCCACTGCCCAC  2193
            ..|...||.||..|||.||||..|||||.||||||.||||.|||||.|||||.|.|||.||||||.|||||||.
Sbjct 2144  AGGGTGCAGCCTGCCGTCAGCGCCTCTTCCACACGTTGCTCGCCATGTACCTCCGTGCAGGCCCCTCTGCCCAG  2217

Query 2194  GAGCTGGCCGTGGCTGCCGTGGACCTGCTGAACCGCCACGCCACCGAATTTGATG-CAGCCCAGGTGCTGCAGA  2266
            ||.|||.|.|||||.||.||||||.|||||||||..||.||||..|||||||||| || |||||||.||.|||.
Sbjct 2218  GATCTGACAGTGGCCGCTGTGGACTTGCTGAACCATCATGCCAGGGAATTTGATGTCA-CCCAGGTCCTACAGC  2290

Query 2267  TGCTGCCTGACACCTGGTCAGTGCAGCTCCTCTGCCCATTCCTGATGGGGGCCATGAGGGACAGCATCCATGCC  2340
            |||||||.|||||||||||.||||||||.||||||||||||||.||||||||.|||||||||||.|||||||||
Sbjct 2291  TGCTGCCAGACACCTGGTCCGTGCAGCTTCTCTGCCCATTCCTCATGGGGGCTATGAGGGACAGTATCCATGCC  2364

Query 2341  AGGAGGACCATGCAGGTGGCTCTCGGCCTGGCCAGGTCCGAAAACTTAATCTACACCTACGATAAGATGAAGTT  2414
            ||||||||||..||||||||.||.||||||||||..||.||||||.|.||.||||..||.||||||||||||.|
Sbjct 2365  AGGAGGACCACACAGGTGGCCCTTGGCCTGGCCAAATCAGAAAACCTGATTTACATGTATGATAAGATGAAGCT  2438

Query 2415  GAAAGGAAGCTCAATCCAACTCTCAGACAAAAAGCTTTGTCAGATATGCCAAAATCCCTTT-TGTGAGCCTGTG  2487
            |||.||.|...||.|||..||||||||...|.|||||||.|||.|.|||||.|| |||||| .||||.||||||
Sbjct 2439  GAAGGGCAATGCAGTCCGGCTCTCAGAACGAGAGCTTTGCCAGCTCTGCCAGAA-CCCTTTCGGTGAACCTGTG  2511

Query 2488  TTTGTTAGATACCCAAATGGTGGTCTTGTGCACACCCACTGTGCCGCCAGCAGACACACAAACCCCAGCTCATC  2561
            |||||.||||||||||||||.||.|||||||||||||||||||||||||||||||||||...|||||||||..|
Sbjct 2512  TTTGTCAGATACCCAAATGGAGGGCTTGTGCACACCCACTGTGCCGCCAGCAGACACACGGCCCCCAGCTCGCC  2585

Query 2562  CAGTCCTGGCACTCGGACT  2580
            |||.|||||||||||||||
Sbjct 2586  CAGCCCTGGCACTCGGACT  2604

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