Nucleotide Global Alignment
Description
- Query:
- TRCN0000466651
- Subject:
- XM_005254606.2
- Aligned Length:
- 3309
- Identities:
- 1237
- Gaps:
- 2031
Alignment
Query 1 ATGTCACTGAACAACTCTTCCAATGTATTTCTGGATTCAGTGCCCAGTAATACCAATCGCTTTCAAGTTAGTGT 74
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATGTCACTGAACAACTCTTCCAATGTATTTCTGGATTCAGTGCCCAGTAATACCAATCGCTTTCAAGTTAGTGT 74
Query 75 CATAAATGAGAACCATGAGAGCAGTGCAGCTGCAGATGACAATACTGACCCACCACATTATGAAGAAACCTCTT 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 75 CATAAATGAGAACCATGAGAGCAGTGCAGCTGCAGATGACAATACTGACCCACCACATTATGAAGAAACCTCTT 148
Query 149 TTGGGGATGAAGCTCAGAAAAGACTCAGAATCAGCTTTAGGCCTGGGAATCAGGAGTGCTATGACAATTTCCTC 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 149 TTGGGGATGAAGCTCAGAAAAGACTCAGAATCAGCTTTAGGCCTGGGAATCAGGAGTGCTATGACAATTTCCTC 222
Query 223 CAAAGTGGAGAAACTGCTAAAACAGATGCCAGTTTTCACGCTTATGATTCTCACACAAACACATACTATCTACA 296
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 223 CAAAGTGGAGAAACTGCTAAAACAGATGCCAGTTTTCACGCTTATGATTCTCACACAAACACATACTATCTACA 296
Query 297 AACTTTTGGCCACAACACCATGGATGCCGTTCCCAAGATAGAGTACTATCGTAACACCGGCAGCATCAGTGGGC 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 297 AACTTTTGGCCACAACACCATGGATGCCGTTCCCAAGATAGAGTACTATCGTAACACCGGCAGCATCAGTGGGC 370
Query 371 CCAAGGTCAACCGACCCAGCCTGCTTGAGATTCACGAGCAACTCGCAAAGAATGTGGCAGTCACCCCAAGTTCA 444
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 371 CCAAGGTCAACCGACCCAGCCTGCTTGAGATTCACGAGCAACTCGCAAAGAATGTGGCAGTCACCCCAAGTTCA 444
Query 445 GCTGACAGAGTTGCTAACGGTGATGGGATACCTGGAGATGAACAAGCTGAAAATAAGGAAGATGATCAAGCTGG 518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 445 GCTGACAGAGTTGCTAACGGTGATGGGATACCTGGAGATGAACAAGCTGAAAATAAGGAAGATGATCAAGCTGG 518
Query 519 TGTTGTGAAGTTTGGATGGGTGAAAGGTGTGCTGGTAAGATGCATGCTGAACATCTGGGGAGTCATGCTCTTCA 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 519 TGTTGTGAAGTTTGGATGGGTGAAAGGTGTGCTGGTAAGATGCATGCTGAACATCTGGGGAGTCATGCTCTTCA 592
Query 593 TTCGCCTCTCCTGGATTGTTGGAGAAGCTGGAATTGGTCTTGGAGTTCTCATAATTCTTCTTTCCA-CCATG-- 663
|||||||||||||||||||||||||||||||||||||||||||.||..|.||.| ||..||| | ||.||
Sbjct 593 TTCGCCTCTCCTGGATTGTTGGAGAAGCTGGAATTGGTCTTGGTGTGATTATCA-TCGGCTT---AGCCGTGAC 662
Query 664 -GTAACTTCTATTACTGGGTTGTCAACTTCTGCGATAGCAACTAACGGGTTTGTTCGTGGAGGTGGGGCCTACT 736
||.|||..|||.|||||.||.||.||.|||||.||.||.||.||.||.|.|||..|.||||||||||||||||
Sbjct 663 AGTGACTGGTATCACTGGTTTATCCACCTCTGCTATTGCCACAAATGGATGTGTCAGAGGAGGTGGGGCCTACT 736
Query 737 ATCTTATTTCCAGAAGTTTAGGGCCCGAGTTCGGTGGGTCAATAGGCCTGATCTTTGCTTTTGCTAATGCAGTG 810
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 737 ATCTTATTTCCAGAAGTTTAGGGCCCGAGTTCGGTGGGTCAATAGGCCTGATCTTTGCTTTTGCTAATGCAGTG 810
Query 811 GCTGTTGCTATGTATGTGGTGGGATTTGCTGAGACTGTAGTAGATCTTCTTAAGGAGAGTGATTCGATGATGGT 884
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 811 GCTGTTGCTATGTATGTGGTGGGATTTGCTGAGACTGTAGTAGATCTTCTTAAGGAGAGTGATTCGATGATGGT 884
Query 885 GGATCCAACCAATGACATCCGGATTATAGGCTCCATCACAGTGGTGATTCTTCTAGGAATTTCAGTAGCTGGAA 958
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 885 GGATCCAACCAATGACATCCGGATTATAGGCTCCATCACAGTGGTGATTCTTCTAGGAATTTCAGTAGCTGGAA 958
Query 959 TGGAATGGGAGGCAAAGGCCCAAGTCATTCTTCTGGTCATTCTTCTAATTGCTATTGCAAACTTCTTCATTGGA 1032
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 959 TGGAATGGGAGGCAAAGGCCCAAGTCATTCTTCTGGTCATTCTTCTAATTGCTATTGCAAACTTCTTCATTGGA 1032
Query 1033 ACTGTCATTCCATCCAACAATGAGAAAAAGTCCAGAGGTTTCTTTAATTACCAAGCATCAATATTTGCAGAAAA 1106
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1033 ACTGTCATTCCATCCAACAATGAGAAAAAGTCCAGAGGTTTCTTTAATTACCAAGCATCAATATTTGCAGAAAA 1106
Query 1107 CTTTGGGCCACGCTTCACAAAGGGTGAAGGCTTCTTCTCTGTCTTTGCCATTTTTTTCCCAGCAGCTACTGGGA 1180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1107 CTTTGGGCCACGCTTCACAAAGGGTGAAGGCTTCTTCTCTGTCTTTGCCATTTTTTTCCCAGCAGCTACTGGGA 1180
Query 1181 TTCTTGCTGGTGCCAATATCTCAGGAGATTTGGAGG-----------------CACTGAGGAAACAAGGAG--- 1234
|||||||||||||||||||||||||||||||||||| |.|.||||||.||.|..|
Sbjct 1181 TTCTTGCTGGTGCCAATATCTCAGGAGATTTGGAGGATCCCCAAGATGCCATCCCCAGAGGAACCATGCTGGCC 1254
Query 1235 -----CTTCACCTCT----CC--CTCA-----------------AGGAGCTCAGAGT----CGAAGGA------ 1270
|.|||||.|| || ||.| |||.|| |.|.|| ||| ||
Sbjct 1255 ATTTTCATCACCACTGTTGCCTACTTAGGGGTTGCAATTTGTGTAGGGGC-CTGTGTGGTCCGA--GATGCCAC 1325
Query 1271 --GGA--------GACAGACTTCCCTTATA-------------------------------------------- 1290
||| |||| ||.|.||.
Sbjct 1326 CGGGAACATGAATGACA-----CCATCATTTCTGGGATGAACTGCAATGGTTCAGCAGCATGTGGGTTGGGCTA 1394
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 1395 TGACTTCTCAAGATGTCGACATGAACCATGTCAGTACGGGCTGATGAACAATTTCCAGGTCATGAGCATGGTAT 1468
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 1469 CAGGGTTCGGCCCCCTCATCACTGCGGGAATCTTTTCTGCAACACTCTCCTCCGCCCTGGCCTCCCTTGTCAGC 1542
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 1543 GCACCCAAAGTGTTCCAGGCTCTGTGCAAGGACAACATCTACAAAGCCCTGCAGTTTTTTGCAAAGGGATATGG 1616
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 1617 GAAAAACAATGAACCCCTGAGAGGATATATTCTCACTTTTCTTATAGCCATGGCATTTATTCTTATTGCGGAAC 1690
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 1691 TGAACACCATTGCTCCCATCATCTCCAACTTTTTCCTGGCCTCATATGCACTTATTAATTTCTCCTGCTTCCAT 1764
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 1765 GCCTCTTATGCCAAATCTCCAGGATGGAGACCTGCGTATGGAATTTACAACATGTGGGTATCTCTTTTTGGAGC 1838
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 1839 TGTTTTGTGCTGTGCAGTCATGTTTGTCATCAACTGGTGGGCAGCTGTCATCACCTATGTCATTGAATTCTTCC 1912
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 1913 TTTACGTCTATGTGACTTGTAAGAAGCCAGATGTGAACTGGGGCTCCTCCACACAGGCTCTTTCCTACGTGAGT 1986
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 1987 GCTTTAGACAATGCTCTGGAATTAACCACAGTGGAAGACCACGTAAAAAACTTCAGGCCCCAGTGCATTGTCTT 2060
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 2061 AACAGGGGGACCCATGACAAGACCTGCTCTCCTGGACATAACTCACGCCTTTACCAAGAACAGTGGCCTTTGCA 2134
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 2135 TCTGCTGTGAAGTCTTTGTGGGACCGCGCAAACTGTGTGTTAAGGAGATGAACAGTGGCATGGCGAAAAAACAG 2208
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 2209 GCCTGGCTTATAAAGAACAAAATCAAGGCTTTTTATGCTGCAGTGGCGGCAGACTGTTTCAGGGATGGTGTCCG 2282
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 2283 AAGTCTTCTTCAGGCCTCAGGCTTAGGAAGAATGAAACCAAACACTCTGGTGATTGGATATAAGAAAAACTGGA 2356
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 2357 GGAAAGCTCCCTTGACAGAGATTGAGAACTACGTGGGAATCATACATGATGCATTTGATTTTGAGATTGGCGTG 2430
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 2431 GTTATAGTCAGAATCAGCCAAGGATTTGACATCTCTCAGGTTCTTCAGGTGCAAGAGGAATTAGAGAGATTAGA 2504
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 2505 ACAGGAGAGACTAGCATTGGAAGCGACTATCAAAGATAATGAGTGTGAAGAGGAAAGTGGAGGCATCCGAGGCT 2578
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 2579 TGTTTAAAAAAGCTGGCAAGTTGAACATTACTAAGACAACGCCTAAAAAAGATGGCAGCATTAACACAAGCCAG 2652
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 2653 TCGATGCATGTGGGAGAGTTCAACCAGAAACTGGTGGAAGCCAGCACTCAATTTAAAAAGAAACAAGAAAAAGG 2726
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 2727 CACAATTGATGTTTGGTGGTTGTTTGATGATGGAGGGTTAACACTTCTTATCCCCTATATCTTAACTCTCAGAA 2800
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 2801 AAAAATGGAAAGACTGTAAATTAAGAATCTATGTGGGAGGGAAGATCAACCGCATTGAAGAAGAAAAAATTGTA 2874
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 2875 ATGGCTTCCCTTCTGAGCAAATTTAGGATAAAATTTGCAGACATCCATATCATCGGTGACATCAACATTAGGCC 2948
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 2949 AAACAAAGAGAGCTGGAAAGTCTTTGAAGAGATGATTGAACCATATCGTCTCCATGAAAGCTGCAAAGATTTAA 3022
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 3023 CAACTGCTGAGAAATTAAAAAGAGAAACTCCGTGGAAAATTACAGATGCAGAACTGGAAGCAGTCAAGGAAAAG 3096
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 3097 AGTTACCGCCAAGTTCGACTGAATGAACTCTTACAGGAGCACTCCAGAGCTGCTAATCTCATTGTCCTGAGCCT 3170
Query 1291 -------------------------------------------------------------------------- 1290
Sbjct 3171 TCCCGTGGCAAGAAAGGGATCCATATCGGATTTGTTGTATATGGCTTGGTTGGAAATCCTCACAAAGAACCTCC 3244
Query 1291 ----------------------------------------------------- 1290
Sbjct 3245 CACCTGTCTTACTAGTTAGAGGAAATCACAAAAATGTCTTGACATTTTACTCT 3297
