Nucleotide Global Alignment

Description

• Query: TRCN0000466913
• Subject: XM_017023338.1
• Aligned Length: 1328
• Identities: 961
• Gaps: 361

Alignment

Query    1  ATGCTGGCGTCTCAAGGAGTTCTCCTGCATCCTTATGGCGTGCCTATG-ATTGTACCG-------GCAGCTCCT  66
                                                         ||| |||||   |       ||||||   
Sbjct    1  ---------------------------------------------ATGAATTGT---GAAAGAGAGCAGCT---  23

Query   67  TACCTTCCTGGACTGATTCA--GGGTAATCAGGAAGCAGCCGCTGCCCCTGACACAATGGCTCAGCCTTACGCT  138
                               |  ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   24  -------------------AAGGGGTAATCAGGAAGCAGCCGCTGCCCCTGACACAATGGCTCAGCCTTACGCT  78

Query  139  TCGGCCCAGTTTGCTCCCCCGCAGAACGGTATCCCCGCGGAATACACGGCCCCTCATCCCCACCCCGCGCCAGA  212
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   79  TCGGCCCAGTTTGCTCCCCCGCAGAACGGTATCCCCGCGGAATACACGGCCCCTCATCCCCACCCCGCGCCAGA  152

Query  213  GTACACAGGCCAGACCACGGTTCCCGAGCACACATTAAACCTGTACCCTCCCGCCCAGACGCACTCCGAGCAGA  286
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  153  GTACACAGGCCAGACCACGGTTCCCGAGCACACATTAAACCTGTACCCTCCCGCCCAGACGCACTCCGAGCAGA  226

Query  287  GCCCGGCGGACACGAGCGCTCAGACCGTCTCTGGCACCGCCACACAGACAGATGACGCAGCACCGACGGATGGC  360
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  227  GCCCGGCGGACACGAGCGCTCAGACCGTCTCTGGCACCGCCACACAGACAGATGACGCAGCACCGACGGATGGC  300

Query  361  CAGCCCCAGACACAACCTTCTGAAAACACGGAAAACAAGTCTCAGCCCAAGCGGCTGCATGTCTCCAATATCCC  434
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  301  CAGCCCCAGACACAACCTTCTGAAAACACGGAAAACAAGTCTCAGCCCAAGCGGCTGCATGTCTCCAATATCCC  374

Query  435  CTTCAGGTTCCGGGATCCGGACCTCAGACAAATGTTTGGTCAATTTGGTAAAATCTTAGATGTTGAAATTATTT  508
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  375  CTTCAGGTTCCGGGATCCGGACCTCAGACAAATGTTTGGTCAATTTGGTAAAATCTTAGATGTTGAAATTATTT  448

Query  509  TTAATGAGCGAGGCTCAAAGGGATTTGGTTTCGTAACTTTCGAAAATAGTGCCGATGCGGACAGGGCGAGGGAG  582
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  449  TTAATGAGCGAGGCTCAAAGGGATTTGGTTTCGTAACTTTCGAAAATAGTGCCGATGCGGACAGGGCGAGGGAG  522

Query  583  AAATTACACGGCACCGTGGTAGAGGGCCGTAAAATCGAGGTAAATAATGCCACAGCACGTGTAATGACAAATAA  656
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  523  AAATTACACGGCACCGTGGTAGAGGGCCGTAAAATCGAGGTAAATAATGCCACAGCACGTGTAATGACAAATAA  596

Query  657  AAAGACCGTCAACCCTTATACAAATGGCTGGAAATTGAATCCAGTTGTGGGTGCAGTCTACAGTCCCGAATTCT  730
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  597  AAAGACCGTCAACCCTTATACAAATGGCTGGAAATTGAATCCAGTTGTGGGTGCAGTCTACAGTCCCGAATTCT  670

Query  731  ATGCAGGCACGGTCCTGTTGTGCCAGGCCAACCAGGAGGGATCTTCCATGTACAGTGCCCCCAGTTCACTTGTA  804
            ||||||                                                                    
Sbjct  671  ATGCAG--------------------------------------------------------------------  676

Query  805  TATACTTCTGCAATGCCAGGCTTCCCGTATCCAGCAGCCACCGCCGCGGCCGCCTACCGAGGGGCGCACCTGCG  878
                         |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  677  -------------TGCCAGGCTTCCCGTATCCAGCAGCCACCGCCGCGGCCGCCTACCGAGGGGCGCACCTGCG  737

Query  879  AGGCCGCGGTCGCACCGTGTACAACACCTTCAGGGCCGCGGCGCCCCCGCCCCCGATCCCGGCCTACGGCGGAG  952
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.|
Sbjct  738  AGGCCGCGGTCGCACCGTGTACAACACCTTCAGGGCCGCGGCGCCCCCGCCCCCGATCCCGGCCTACGGCGGTG  811

Query  953  TAGTGTATCAAGAGCCTG---TGTATGGCAATAAATTGCTGCAG--------GGTGGTTATGCTGCATACCGCT  1015
            |.||.||.||.||   ||   |.|||||           |||||        ||||||||||||||||||||||
Sbjct  812  TTGTTTACCAGGA---TGGATTTTATGG-----------TGCAGACATTTATGGTGGTTATGCTGCATACCGCT  871

Query 1016  ACGCCCAGCCTACCCCTGCCACTGCCGCTGCCTACAGTGACAGAAATCAGTTCGTCTTCGTTGCAGCAGATGAA  1089
            ||||||||||||||||||||||||||||||||||||||||                                  
Sbjct  872  ACGCCCAGCCTACCCCTGCCACTGCCGCTGCCTACAGTGA----------------------------------  911

Query 1090  ATTTCTTGTAACACCTCTGCAGTTACGGACGAGTTTATGCTGCCGACCCCTACCACCACGCACTTGCTCCAGCC  1163
                               |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  912  -------------------CAGTTACGGACGAGTTTATGCTGCCGACCCCTACCACCACGCACTTGCTCCAGCC  966

Query 1164  CCCACCTACGGCGTTGGTGCCA----------------------------------------------------  1185
            ||||||||||||||||||||||                                                    
Sbjct  967  CCCACCTACGGCGTTGGTGCCATGAATGCTTTTGCACCTTTGACTGATGCCAAGACTAGGAGCCATGCTGATGA  1040

Query 1186  ----------------------------------------------------------------------  1185
                                                                                  
Sbjct 1041  TGTGGGTCTCGTTCTTTCTTCATTGCAGGCTAGTATATACCGAGGGGGATACAACCGTTTTGCTCCATAC  1110