Nucleotide Global Alignment

Description

Query:
TRCN0000467145
Subject:
XM_011536985.1
Aligned Length:
1585
Identities:
863
Gaps:
713

Alignment

Query    1  ATGGCCAGAAAGGCTCTCAAGCTTGCTTCGTGGACCAGCATGGCTCTTGCTGCCTCTGGCATCTACTTCTACAG  74
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query   75  TAACAAGTACTTGGACCCTAATGACTTTGGCGCTGTCAGGGTGGGCAGAGCAGTTGCTACGACGGCTGTCATCA  148
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  149  GTTACGACTACCTCACTTCCCTGAAGAGTGTCCCTTATGGCTCAGAGGAGTACTTGCAGCTGAGATCTAAGGTG  222
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  223  CACCTTCGCTCTGCCAGGCGTCTCTGTGAGCTCTGCTGTGCCAACCGGGGCACCTTCATCAAGGTGGGCCAGCA  296
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  297  CCTGGGGGCTCTGGACTACCTGTTGCCAGAGGAGTACACCAGCACGCTGAAGGTACTGCACAGCCAGGCTCCAC  370
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  371  AGAGCAGCATGCAAGAGATCCGCCAGGTCATCCGAGAAGATCTGGGCAAGGAGATCCATGATTTGTTCCAGAGC  444
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  445  TTCGATGACACCCCTCTGGGGACGGCCTCCCTGGCCCAGGTCCACAAGGCAGTGCTGCATGATGGGCGGACGGT  518
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  519  GGCCGTGAAGGTCCAGCACCCAAAGGTGCGGGCTCAGAGCTCGAAGGACATTCTCCTGATGGAGGTGCTCGTTC  592
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  593  TGGCTGTGAAGCAGCTGTTCCCAGAGTTTGAGTTTATGTGGCTTGTGGATGAAGCCAAGAAGAACCTGCCTTTG  666
                                                                                      
Sbjct    1  --------------------------------------------------------------------------  0

Query  667  GAGCTGGATTTCCTCAATGAAGGGA-GGAATGCTGAGAAGGTGTCCCAGATG-------CTCAGGCATTTTGAC  732
                               |.|||| .|||.|.|| .||||    |||||||       ||||      ..|||
Sbjct    1  -------------------ATGGGACAGAAAGTTG-TAAGG----CCAGATGTGGGTGACTCA------CCGAC  44

Query  733  T--------TCTTGAAGGTCCCCCGAATCCACTGGGACCTGTCCACGGAGCGGGTCCTCCTGATGGAGTTTGTG  798
            |        |.|.| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct   45  TCGCAGCGATGTCG-AGGTCCCCCGAATCCACTGGGACCTGTCCACGGAGCGGGTCCTCCTGATGGAGTTTGTG  117

Query  799  GATGGCGGGCAGGTCAATGACAGAGACTACATGGAGAGGAACAAGATCGACGTCAATGAGATCTCACGCCACCT  872
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  118  GATGGCGGGCAGGTCAATGACAGAGACTACATGGAGAGGAACAAGATCGACGTCAATGAGATCTCACGCCACCT  191

Query  873  GGGCAAGATGTATAGTGAGATGATCTTCGTCAATGGCTTCGTGCACTGCGATCCCCACCCCGGCAATGTACTGG  946
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  192  GGGCAAGATGTATAGTGAGATGATCTTCGTCAATGGCTTCGTGCACTGCGATCCCCACCCCGGCAATGTACTGG  265

Query  947  TGCGGAAGCACCCCGGCACGGGAAAGGCGGAGATTGTCCTGTTGGACCATGGGCTTTACCAGATGCTCACGGAA  1020
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  266  TGCGGAAGCACCCCGGCACGGGAAAGGCGGAGATTGTCCTGTTGGACCATGGGCTTTACCAGATGCTCACGGAA  339

Query 1021  GAATTCCGCCTGAATTACTGCCACCTCTGGCAGTCTCTGATCTGGACTGACATGAAGAGAGTGAAGGAGTACAG  1094
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  340  GAATTCCGCCTGAATTACTGCCACCTCTGGCAGTCTCTGATCTGGACTGACATGAAGAGAGTGAAGGAGTACAG  413

Query 1095  CCAGCGACTGGGAGCCGGGGATCTCTACCCCTTGTTTGCCTGCATGCTGACGGCGCGATCGTGGGACTCGGTCA  1168
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  414  CCAGCGACTGGGAGCCGGGGATCTCTACCCCTTGTTTGCCTGCATGCTGACGGCGCGATCGTGGGACTCGGTCA  487

Query 1169  ACAGAGGCATCAGCCAAGCTCCCGTCACTGCCACTGAGGACTTAGAGATTCGCAACAACGCGGCCAACTACCTC  1242
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  488  ACAGAGGCATCAGCCAAGCTCCCGTCACTGCCACTGAGGACTTAGAGATTCGCAACAACGCGGCCAACTACCTC  561

Query 1243  CCCCAGATCAGCCATCTCCTCAACCACGTGCCGCGCCAGATGCTGCTCATCTTGAAGACCAACGACCTGCTGCG  1316
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  562  CCCCAGATCAGCCATCTCCTCAACCACGTGCCGCGCCAGATGCTGCTCATCTTGAAGACCAACGACCTGCTGCG  635

Query 1317  TGGCATTGAGGCCGCCCTGGGCACCCGCGCCAGCGCCAGCTCCTTTCTCAACATGTCACGTTGCTGCATCAGAG  1390
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  636  TGGCATTGAGGCCGCCCTGGGCACCCGCGCCAGCGCCAGCTCCTTTCTCAACATGTCACGTTGCTGCATCAGAG  709

Query 1391  CGCTAGCTGAGCACAAGAAGAAGAATACCTGTTCATTCTTCAGAAGGACCCAGATCTCTTTCAGCGAGGCCTTC  1464
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  710  CGCTAGCTGAGCACAAGAAGAAGAATACCTGTTCATTCTTCAGAAGGACCCAGATCTCTTTCAGCGAGGCCTTC  783

Query 1465  AACTTATGGCAGATCAACCTCCATGAGCTCATCCTGCGTGTGAAGGGGTTGAAGCTGGCTGACCGGGTCTTGGC  1538
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  784  AACTTATGGCAGATCAACCTCCATGAGCTCATCCTGCGTGTGAAGGGGTTGAAGCTGGCTGACCGGGTCTTGGC  857

Query 1539  CCTAATATGCTGGCTGTTCCCTGCTCCACTC  1569
            |||||||||||||||||||||||||||||||
Sbjct  858  CCTAATATGCTGGCTGTTCCCTGCTCCACTC  888

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